Remove datasets from GeometricFlux

Author: yuehhua

Manifest.toml

@@ -14,9 +14,9 @@ version = "0.3.3"
 
 [[Adapt]]
 deps = ["LinearAlgebra"]
-git-tree-sha1 = "0fac443759fa829ed8066db6cf1077d888bb6573"
+git-tree-sha1 = "95f8bda0555209f122bc796b0382ea4a3a121720"
 uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e"
-version = "2.0.2"
+version = "2.1.0"
 
 [[ArnoldiMethod]]
 deps = ["DelimitedFiles", "LinearAlgebra", "Random", "SparseArrays", "StaticArrays", "Test"]
@@ -25,10 +25,10 @@ uuid = "ec485272-7323-5ecc-a04f-4719b315124d"
 version = "0.0.4"
 
 [[ArrayLayouts]]
-deps = ["FillArrays", "LinearAlgebra", "SparseArrays"]
-git-tree-sha1 = "bd09f450716f55c5a47b24de277a8825e2450729"
+deps = ["Compat", "FillArrays", "LinearAlgebra", "SparseArrays"]
+git-tree-sha1 = "d6f1ecde467019346f7601fb2ee58cb2bc60d121"
 uuid = "4c555306-a7a7-4459-81d9-ec55ddd5c99a"
-version = "0.4.7"
+version = "0.4.8"
 
 [[Base64]]
 uuid = "2a0f44e3-6c83-55bd-87e4-b1978d98bd5f"
@@ -82,9 +82,9 @@ version = "0.8.2"
 
 [[ChainRules]]
 deps = ["ChainRulesCore", "LinearAlgebra", "Random", "Reexport", "Requires", "Statistics"]
-git-tree-sha1 = "6e7424bc42e222570cc8d588c501349070802b3f"
+git-tree-sha1 = "60b76639ff1dc573b0708a68924539d03ed6520b"
 uuid = "082447d4-558c-5d27-93f4-14fc19e9eca2"
-version = "0.7.18"
+version = "0.7.20"
 
 [[ChainRulesCore]]
 deps = ["LinearAlgebra", "MuladdMacro"]
@@ -239,9 +239,9 @@ uuid = "9fa8497b-333b-5362-9e8d-4d0656e87820"
 
 [[GPUArrays]]
 deps = ["AbstractFFTs", "Adapt", "LinearAlgebra", "Printf", "Random", "Serialization"]
-git-tree-sha1 = "600f45500060894487832c2f00c203fe3e0cb264"
+git-tree-sha1 = "d3a68bdf4868f3922f5b9bcb2cbf2776d5c0ecf5"
 uuid = "0c68f7d7-f131-5f86-a1c3-88cf8149b2d7"
-version = "5.1.0"
+version = "5.2.0"
 
 [[GPUCompiler]]
 deps = ["DataStructures", "InteractiveUtils", "LLVM", "Libdl", "TimerOutputs", "UUIDs"]
@@ -281,9 +281,9 @@ version = "1.10.5+5"
 
 [[HTTP]]
 deps = ["Base64", "Dates", "IniFile", "MbedTLS", "Sockets"]
-git-tree-sha1 = "2ac03263ce44be4222342bca1c51c36ce7566161"
+git-tree-sha1 = "c7ec02c4c6a039a98a15f955462cd7aea5df4508"
 uuid = "cd3eb016-35fb-5094-929b-558a96fad6f3"
-version = "0.8.17"
+version = "0.8.19"
 
 [[IRTools]]
 deps = ["InteractiveUtils", "MacroTools", "Test"]
@@ -329,12 +329,6 @@ git-tree-sha1 = "81690084b6198a2e1da36fcfda16eeca9f9f24e4"
 uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6"
 version = "0.21.1"
 
-[[JSON]]
-deps = ["Dates", "Mmap", "Parsers", "Unicode"]
-git-tree-sha1 = "81690084b6198a2e1da36fcfda16eeca9f9f24e4"
-uuid = "682c06a0-de6a-54ab-a142-c8b1cf79cde6"
-version = "0.21.1"
-
 [[Juno]]
 deps = ["Base64", "Logging", "Media", "Profile"]
 git-tree-sha1 = "90976c3ab792a98d240d42f9df07420ccfc60668"
@@ -419,7 +413,7 @@ git-tree-sha1 = "b26cdcfa188b6de8c51f2b9580ff2824c45bb459"
 repo-rev = "master"
 repo-url = "https://github.com/JuliaGraphs/MetaGraphs.jl.git"
 uuid = "626554b9-1ddb-594c-aa3c-2596fe9399a5"
-version = "0.6.3"
+version = "0.6.5"
 
 [[Missings]]
 deps = ["DataAPI"]
@@ -468,12 +462,6 @@ git-tree-sha1 = "8077624b3c450b15c087944363606a6ba12f925e"
 uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0"
 version = "1.0.10"
 
-[[Parsers]]
-deps = ["Dates", "Test"]
-git-tree-sha1 = "8077624b3c450b15c087944363606a6ba12f925e"
-uuid = "69de0a69-1ddd-5017-9359-2bf0b02dc9f0"
-version = "1.0.10"
-
 [[Pkg]]
 deps = ["Dates", "LibGit2", "Libdl", "Logging", "Markdown", "Printf", "REPL", "Random", "SHA", "UUIDs"]
 uuid = "44cfe95a-1eb2-52ea-b672-e2afdf69b78f"
@@ -514,9 +502,9 @@ version = "0.2.0"
 
 [[Requires]]
 deps = ["UUIDs"]
-git-tree-sha1 = "8c08d0c7812169e438a8478dae2a529377ad13f7"
+git-tree-sha1 = "2fc2e1ab606a5dca7bbad9036a694553c3a57926"
 uuid = "ae029012-a4dd-5104-9daa-d747884805df"
-version = "1.0.2"
+version = "1.0.3"
 
 [[SHA]]
 uuid = "ea8e919c-243c-51af-8825-aaa63cd721ce"
@@ -676,9 +664,9 @@ version = "1.4.5+1"
 
 [[Zygote]]
 deps = ["AbstractFFTs", "ArrayLayouts", "ChainRules", "DiffRules", "Distributed", "FillArrays", "ForwardDiff", "Future", "IRTools", "InteractiveUtils", "LinearAlgebra", "LoopVectorization", "MacroTools", "NNlib", "NaNMath", "Random", "Requires", "SpecialFunctions", "Statistics", "ZygoteRules"]
-git-tree-sha1 = "b0a948a0a78e3e41515714fa1ef4f40a284ffa06"
+git-tree-sha1 = "e7b3106f045bd6e526708d1a7821ee9ecc24d094"
 uuid = "e88e6eb3-aa80-5325-afca-941959d7151f"
-version = "0.5.6"
+version = "0.5.7"
 
 [[ZygoteRules]]
 deps = ["MacroTools"]

Project.toml

@@ -5,21 +5,14 @@ version = "0.7.0"
 
 [deps]
 CUDA = "052768ef-5323-5732-b1bb-66c8b64840ba"
-DataDeps = "124859b0-ceae-595e-8997-d05f6a7a8dfe"
 DataStructures = "864edb3b-99cc-5e75-8d2d-829cb0a9cfe8"
 FillArrays = "1a297f60-69ca-5386-bcde-b61e274b549b"
 Flux = "587475ba-b771-5e3f-ad9e-33799f191a9c"
 GraphMLDatasets = "21828b05-d3b3-40ad-870e-a4bc2f52d5e8"
 GraphSignals = "3ebe565e-a4b5-49c6-aed2-300248c3a9c1"
-HTTP = "cd3eb016-35fb-5094-929b-558a96fad6f3"
-IRTools = "7869d1d1-7146-5819-86e3-90919afe41df"
-JLD2 = "033835bb-8acc-5ee8-8aae-3f567f8a3819"
-JSON = "682c06a0-de6a-54ab-a142-c8b1cf79cde6"
 LightGraphs = "093fc24a-ae57-5d10-9952-331d41423f4d"
 LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
-MAT = "23992714-dd62-5051-b70f-ba57cb901cac"
 MetaGraphs = "626554b9-1ddb-594c-aa3c-2596fe9399a5"
-PyCall = "438e738f-606a-5dbb-bf0a-cddfbfd45ab0"
 Random = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"
 Reexport = "189a3867-3050-52da-a836-e630ba90ab69"
 Requires = "ae029012-a4dd-5104-9daa-d747884805df"
@@ -33,16 +26,11 @@ ZygoteRules = "700de1a5-db45-46bc-99cf-38207098b444"
 
 [compat]
 CUDA = "1.2"
-DataDeps = "0.7"
 DataStructures = "0.17, 0.18"
 FillArrays = "0.8 - 0.9"
 Flux = "0.10 - 0.11"
 GraphMLDatasets = "0.1"
 GraphSignals = "0.1"
-HTTP = "0.8"
-IRTools = "0.4"
-JLD2 = "0.1 - 0.2"
-JSON = "0.21"
 LightGraphs = "1.3"
 MetaGraphs = "0.6.5"
 Reexport = "0.2"

src/GeometricFlux.jl

@@ -4,7 +4,6 @@ using Statistics: mean
 using SparseArrays: SparseMatrixCSC
 using LinearAlgebra: Adjoint, norm
 
-using DataDeps: DataDep, register
 using FillArrays: Fill
 using Flux
 using Flux: glorot_uniform, leakyrelu, GRUCell
@@ -19,11 +18,6 @@ using ZygoteRules
 import Flux: maxpool, meanpool
 
 export
-    datasets,
-    traindata,
-    validdata,
-    testdata,
-
     # layers/gn
     GraphNet,
     update_edge,