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Changed "strand" back to top.
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code/Taxonomic_assignment.R

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -21,7 +21,7 @@ setwd(script_path)
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load(db)
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dna <- DNAStringSet(getSequences(seqtab.nochim))
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tax_info <- IdTaxa(test=dna, trainingSet=trainingSet, strand="top", processors=NULL, threshold=60)
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tax_info <- IdTaxa(test=dna, trainingSet=trainingSet, strand="both", processors=NULL, threshold=60)
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#RENAMING ASVs
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