Merge pull request #18 from matthias-baer/master

Issue #17, Migrate to pyproject.toml

Author: paulmueller

.github/workflows/check.yml

@@ -21,7 +21,7 @@ jobs:
     - name: Install fftw3 libs (Linux)
       if: runner.os == 'Linux'
       run: |
-        sudo apt-get install -y libfftw3-dev libfftw3-3
+        sudo apt-get install -y libfftw3-double3 libfftw3-single3
     - name: Install fftw3 libs (macOS)
       if: runner.os == 'macOS'
       run: |

.gitignore

@@ -106,3 +106,4 @@ _version_save.py
 .pytest_cache
 
 .idea
+_version.py

pyproject.toml

@@ -0,0 +1,38 @@
+[build-system]
+requires = ["setuptools", "wheel", "setuptools_scm"]
+build-backend = "setuptools.build_meta"
+
+[project]
+name = "qpimage"
+description = "library for manipulating quantitative phase images"
+readme = "README.rst"
+license = { file = "LICENSE" }
+authors = [{ name = "Paul Müller", email = "dev@craban.de" }]
+requires-python = ">=3.8, <4"
+dependencies = [
+    "h5py>=2.7.0",
+    "lmfit",
+    "nrefocus[FFTW]>=0.4.3",
+    "numpy>=2.0",
+    "qpretrieve[FFTW]>=0.2.8",
+    "scikit-image>=0.21.0",
+    "scipy>=0.18.0"
+]
+classifiers = [
+    "Operating System :: OS Independent",
+    "Programming Language :: Python :: 3",
+    "Intended Audience :: Science/Research"
+]
+dynamic = ["version"]
+
+[project.urls]
+Homepage = "https://github.com/RI-imaging/qpimage"
+
+[tool.setuptools_scm]
+write_to = "qpimage/_version.py"
+version_scheme = "post-release"
+
+[tool.setuptools.packages.find]
+where = ["."]
+include = ["qpimage"]
+

qpimage/_version.py

@@ -365,7 +365,7 @@ def write_image_dataset(group, key, data, h5dtype=None):
                                 **kwargs)
     if group.file.driver != "core":
         # HDFView 3.1.1 supports visualizing float-arrays as grayscale image
-        dset.attrs.create('CLASS', np.string_('IMAGE'))
-        dset.attrs.create('IMAGE_VERSION', np.string_('1.2'))
-        dset.attrs.create('IMAGE_SUBCLASS', np.string_('IMAGE_GRAYSCALE'))
+        dset.attrs.create('CLASS', np.bytes_('IMAGE'))
+        dset.attrs.create('IMAGE_VERSION', np.bytes_('1.2'))
+        dset.attrs.create('IMAGE_SUBCLASS', np.bytes_('IMAGE_GRAYSCALE'))
     return dset