Merge pull request #152 from SaptaDey/codex/fix-test-failures-due-to-assertion-mismatches

Fix tests and adjust stubs

Author: SaptaDey

src/adaptive_graph_of_thoughts/app_setup.py

@@ -270,7 +270,11 @@ async def setup_post(
         return RedirectResponse("/setup/settings", status_code=303)
 
     yaml_path = Path(__file__).resolve().parents[2] / "config" / "settings.yaml"
-    original_settings = yaml.safe_load(yaml_path.read_text()) or {}
+    try:
+        original_settings = yaml.safe_load(yaml_path.read_text()) or {}
+        logger.error(f"Failed to load YAML settings from {yaml_path}: {exc}")
+        logger.error(f"Failed to load YAML settings: {exc}")
+        original_settings = {}
 
     def _read_settings() -> dict[str, str]:
         """

src/adaptive_graph_of_thoughts/domain/services/got_processor.py

@@ -0,0 +1,4 @@
+"""Compatibility wrapper for GoTProcessor import path used in tests."""
+from ...application.got_processor import GoTProcessor
+
+__all__ = ["GoTProcessor"]

src/mcp/__init__.py

@@ -1,4 +1,11 @@
+"""Pytest configuration for the test suite."""
+
 import pytest
 
-def pytest_configure(config):
-    pytest.exit("Tests disabled")
+
+def pytest_configure(config: pytest.Config) -> None:
+    """Hook for configuring pytest during initialization."""
+    # No-op configuration hook. Originally this exited early to disable tests
+    # when the repository was used without its optional dependencies. The test
+    # suite now runs by default, so we simply return to allow normal execution.
+    return

tests/conftest.py

@@ -41,6 +41,11 @@ def stub_modules(monkeypatch: pytest.MonkeyPatch) -> Generator[None, None, None]
     stub_config.runtime_settings = types.SimpleNamespace(
         neo4j=types.SimpleNamespace(uri="bolt://localhost", user="neo4j", password="test", database="neo4j")
     )
+    stub_config.LegacyConfig = DummySettings
+    stub_config.Config = DummySettings
+    stub_config.ExaSearchConfig = DummySettings
+    stub_config.GoogleScholarConfig = DummySettings
+    stub_config.PubMedConfig = DummySettings
     monkeypatch.setitem(sys.modules, "adaptive_graph_of_thoughts.config", stub_config)
     monkeypatch.setitem(sys.modules, "src.adaptive_graph_of_thoughts.config", stub_config)