Merge branch 'master' into master

Author: KrishGaur1354

.github/dependabot.yml

@@ -5,3 +5,6 @@ updates:
     directory: "/" # Location of package manifests
     schedule:
       interval: "weekly"
+    ignore:
+      - dependency-name: "crate-ci/typos"
+        update-types: ["version-update:semver-patch", "version-update:semver-minor"]

.github/workflows/CI.yml

@@ -25,6 +25,7 @@ jobs:
           - Downstream
           - ODEInterfaceRegression
           - Multithreading
+          - QA
 
           - OrdinaryDiffEqAdamsBashforthMoulton
           - OrdinaryDiffEqBDF

Project.toml

@@ -1,39 +1,39 @@
 name = "ImplicitDiscreteSolve"
 uuid = "3263718b-31ed-49cf-8a0f-35a466e8af96"
 authors = ["vyudu <vincent.duyuan@gmail.com>"]
-version = "0.1.3"
-
-[sources]
-OrdinaryDiffEqCore = {path = "../OrdinaryDiffEqCore"}
+version = "1.0.0"
 
 [deps]
-DiffEqBase = "2b5f629d-d688-5b77-993f-72d75c75574e"
-OrdinaryDiffEqCore = "bbf590c4-e513-4bbe-9b18-05decba2e5d8"
-Reexport = "189a3867-3050-52da-a836-e630ba90ab69"
-SciMLBase = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
 SimpleNonlinearSolve = "727e6d20-b764-4bd8-a329-72de5adea6c7"
 SymbolicIndexingInterface = "2efcf032-c050-4f8e-a9bb-153293bab1f5"
 UnPack = "3a884ed6-31ef-47d7-9d2a-63182c4928ed"
+DiffEqBase = "2b5f629d-d688-5b77-993f-72d75c75574e"
+Reexport = "189a3867-3050-52da-a836-e630ba90ab69"
+OrdinaryDiffEqCore = "bbf590c4-e513-4bbe-9b18-05decba2e5d8"
+SciMLBase = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
+
+[extras]
+JET = "c3a54625-cd67-489e-a8e7-0a5a0ff4e31b"
+OrdinaryDiffEqSDIRK = "2d112036-d095-4a1e-ab9a-08536f3ecdbf"
+Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
+Aqua = "4c88cf16-eb10-579e-8560-4a9242c79595"
 
 [compat]
-DiffEqBase = "6.164.1"
-OrdinaryDiffEqCore = "1.18.1"
+Test = "1.10.0"
 OrdinaryDiffEqSDIRK = "1.2.0"
-Reexport = "1.2.2"
 SciMLBase = "2.74.1"
 SimpleNonlinearSolve = "2.1.0"
+OrdinaryDiffEqCore = "1.18.1"
+Aqua = "0.8.11"
 SymbolicIndexingInterface = "0.3.38"
-Test = "1.10.0"
-UnPack = "1.0.2"
 julia = "1.10"
 JET = "0.9.18, 0.10.4"
-Aqua = "0.8.11"
-
-[extras]
-OrdinaryDiffEqSDIRK = "2d112036-d095-4a1e-ab9a-08536f3ecdbf"
-Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
-JET = "c3a54625-cd67-489e-a8e7-0a5a0ff4e31b"
-Aqua = "4c88cf16-eb10-579e-8560-4a9242c79595"
+UnPack = "1.0.2"
+DiffEqBase = "6.164.1"
+Reexport = "1.2.2"
 
 [targets]
 test = ["OrdinaryDiffEqSDIRK", "Test", "JET", "Aqua"]
+
+[sources.OrdinaryDiffEqCore]
+path = "../OrdinaryDiffEqCore"

lib/ImplicitDiscreteSolve/Project.toml

@@ -11,7 +11,7 @@ import OrdinaryDiffEqCore: OrdinaryDiffEqAlgorithm, alg_cache, OrdinaryDiffEqMut
                            _initialize_dae!, DefaultInit, BrownFullBasicInit, OverrideInit
 
 using Reexport
-@reexport using DiffEqBase
+@reexport using SciMLBase
 
 """
     IDSolve()

lib/ImplicitDiscreteSolve/src/ImplicitDiscreteSolve.jl

@@ -1,51 +1,55 @@
 name = "OrdinaryDiffEqAdamsBashforthMoulton"
 uuid = "89bda076-bce5-4f1c-845f-551c83cdda9a"
 authors = ["ParamThakkar123 <paramthakkar864@gmail.com>"]
-version = "1.2.0"
-
-[sources]
-OrdinaryDiffEqCore = {path = "../OrdinaryDiffEqCore"}
-OrdinaryDiffEqLowOrderRK = {path = "../OrdinaryDiffEqLowOrderRK"}
+version = "1.3.0"
 
 [deps]
-DiffEqBase = "2b5f629d-d688-5b77-993f-72d75c75574e"
+Reexport = "189a3867-3050-52da-a836-e630ba90ab69"
+Polyester = "f517fe37-dbe3-4b94-8317-1923a5111588"
+Static = "aedffcd0-7271-4cad-89d0-dc628f76c6d3"
 FastBroadcast = "7034ab61-46d4-4ed7-9d0f-46aef9175898"
-MuladdMacro = "46d2c3a1-f734-5fdb-9937-b9b9aeba4221"
-OrdinaryDiffEqCore = "bbf590c4-e513-4bbe-9b18-05decba2e5d8"
 OrdinaryDiffEqLowOrderRK = "1344f307-1e59-4825-a18e-ace9aa3fa4c6"
-Polyester = "f517fe37-dbe3-4b94-8317-1923a5111588"
 RecursiveArrayTools = "731186ca-8d62-57ce-b412-fbd966d074cd"
-Reexport = "189a3867-3050-52da-a836-e630ba90ab69"
-Static = "aedffcd0-7271-4cad-89d0-dc628f76c6d3"
+SciMLBase = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
+DiffEqBase = "2b5f629d-d688-5b77-993f-72d75c75574e"
+MuladdMacro = "46d2c3a1-f734-5fdb-9937-b9b9aeba4221"
+OrdinaryDiffEqCore = "bbf590c4-e513-4bbe-9b18-05decba2e5d8"
+
+[extras]
+JET = "c3a54625-cd67-489e-a8e7-0a5a0ff4e31b"
+Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
+Random = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"
+DiffEqDevTools = "f3b72e0c-5b89-59e1-b016-84e28bfd966d"
+ODEProblemLibrary = "fdc4e326-1af4-4b90-96e7-779fcce2daa5"
+Aqua = "4c88cf16-eb10-579e-8560-4a9242c79595"
+DiffEqBase = "2b5f629d-d688-5b77-993f-72d75c75574e"
+SafeTestsets = "1bc83da4-3b8d-516f-aca4-4fe02f6d838f"
 
 [compat]
-DiffEqBase = "6.152.2"
-DiffEqDevTools = "2.44.4"
+Test = "<0.0.1, 1"
 FastBroadcast = "0.3.5"
+Random = "<0.0.1, 1"
+DiffEqDevTools = "2.44.4"
 MuladdMacro = "0.2.4"
-ODEProblemLibrary = "0.1.8"
+Polyester = "0.7.16"
+SciMLBase = "2"
 OrdinaryDiffEqCore = "1.1"
+Static = "1.1.1"
 OrdinaryDiffEqLowOrderRK = "<0.0.1, 1"
-Polyester = "0.7.16"
-Random = "<0.0.1, 1"
+Aqua = "0.8.11"
+julia = "1.10"
+JET = "0.9.18, 0.10.4"
 RecursiveArrayTools = "3.27.0"
+ODEProblemLibrary = "0.1.8"
+DiffEqBase = "6.152.2"
 Reexport = "1.2.2"
 SafeTestsets = "0.1.0"
-Static = "1.1.1"
-Test = "<0.0.1, 1"
-julia = "1.10"
-JET = "0.9.18, 0.10.4"
-Aqua = "0.8.11"
-
-[extras]
-DiffEqBase = "2b5f629d-d688-5b77-993f-72d75c75574e"
-DiffEqDevTools = "f3b72e0c-5b89-59e1-b016-84e28bfd966d"
-ODEProblemLibrary = "fdc4e326-1af4-4b90-96e7-779fcce2daa5"
-Random = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"
-SafeTestsets = "1bc83da4-3b8d-516f-aca4-4fe02f6d838f"
-Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
-JET = "c3a54625-cd67-489e-a8e7-0a5a0ff4e31b"
-Aqua = "4c88cf16-eb10-579e-8560-4a9242c79595"
 
 [targets]
 test = ["DiffEqDevTools", "ODEProblemLibrary", "Random", "SafeTestsets", "Test", "DiffEqBase", "JET", "Aqua"]
+
+[sources.OrdinaryDiffEqLowOrderRK]
+path = "../OrdinaryDiffEqLowOrderRK"
+
+[sources.OrdinaryDiffEqCore]
+path = "../OrdinaryDiffEqCore"

lib/OrdinaryDiffEqAdamsBashforthMoulton/Project.toml

@@ -18,7 +18,7 @@ import Static: False
 import OrdinaryDiffEqCore
 
 using Reexport
-@reexport using DiffEqBase
+@reexport using SciMLBase
 
 include("algorithms.jl")
 include("alg_utils.jl")

lib/OrdinaryDiffEqAdamsBashforthMoulton/src/OrdinaryDiffEqAdamsBashforthMoulton.jl

@@ -1,77 +1,85 @@
 name = "OrdinaryDiffEqBDF"
 uuid = "6ad6398a-0878-4a85-9266-38940aa047c8"
 authors = ["ParamThakkar123 <paramthakkar864@gmail.com>"]
-version = "1.7.0"
+version = "1.8.0"
 
 [deps]
-ADTypes = "47edcb42-4c32-4615-8424-f2b9edc5f35b"
-ArrayInterface = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9"
-DiffEqBase = "2b5f629d-d688-5b77-993f-72d75c75574e"
 FastBroadcast = "7034ab61-46d4-4ed7-9d0f-46aef9175898"
-LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
-MacroTools = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09"
 MuladdMacro = "46d2c3a1-f734-5fdb-9937-b9b9aeba4221"
-OrdinaryDiffEqCore = "bbf590c4-e513-4bbe-9b18-05decba2e5d8"
+PrecompileTools = "aea7be01-6a6a-4083-8856-8a6e6704d82a"
+LinearAlgebra = "37e2e46d-f89d-539d-b4ee-838fcccc9c8e"
 OrdinaryDiffEqDifferentiation = "4302a76b-040a-498a-8c04-15b101fed76b"
-OrdinaryDiffEqNonlinearSolve = "127b3ac7-2247-4354-8eb6-78cf4e7c58e8"
 OrdinaryDiffEqSDIRK = "2d112036-d095-4a1e-ab9a-08536f3ecdbf"
-PrecompileTools = "aea7be01-6a6a-4083-8856-8a6e6704d82a"
+TruncatedStacktraces = "781d530d-4396-4725-bb49-402e4bee1e77"
+SciMLBase = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
+OrdinaryDiffEqCore = "bbf590c4-e513-4bbe-9b18-05decba2e5d8"
+ArrayInterface = "4fba245c-0d91-5ea0-9b3e-6abc04ee57a9"
 Preferences = "21216c6a-2e73-6563-6e65-726566657250"
+MacroTools = "1914dd2f-81c6-5fcd-8719-6d5c9610ff09"
+StaticArrays = "90137ffa-7385-5640-81b9-e52037218182"
+ADTypes = "47edcb42-4c32-4615-8424-f2b9edc5f35b"
 RecursiveArrayTools = "731186ca-8d62-57ce-b412-fbd966d074cd"
+OrdinaryDiffEqNonlinearSolve = "127b3ac7-2247-4354-8eb6-78cf4e7c58e8"
+DiffEqBase = "2b5f629d-d688-5b77-993f-72d75c75574e"
 Reexport = "189a3867-3050-52da-a836-e630ba90ab69"
-StaticArrays = "90137ffa-7385-5640-81b9-e52037218182"
-TruncatedStacktraces = "781d530d-4396-4725-bb49-402e4bee1e77"
 
-[sources]
-OrdinaryDiffEqCore = {path = "../OrdinaryDiffEqCore"}
-OrdinaryDiffEqDifferentiation = {path = "../OrdinaryDiffEqDifferentiation"}
-OrdinaryDiffEqNonlinearSolve = {path = "../OrdinaryDiffEqNonlinearSolve"}
-OrdinaryDiffEqSDIRK = {path = "../OrdinaryDiffEqSDIRK"}
+[extras]
+NonlinearSolve = "8913a72c-1f9b-4ce2-8d82-65094dcecaec"
+ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210"
+Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
+Random = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"
+DiffEqDevTools = "f3b72e0c-5b89-59e1-b016-84e28bfd966d"
+LinearSolve = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae"
+Aqua = "4c88cf16-eb10-579e-8560-4a9242c79595"
+Enzyme = "7da242da-08ed-463a-9acd-ee780be4f1d9"
+JET = "c3a54625-cd67-489e-a8e7-0a5a0ff4e31b"
+StaticArrays = "90137ffa-7385-5640-81b9-e52037218182"
+ODEProblemLibrary = "fdc4e326-1af4-4b90-96e7-779fcce2daa5"
+SafeTestsets = "1bc83da4-3b8d-516f-aca4-4fe02f6d838f"
 
 [compat]
-ADTypes = "1.11"
-Aqua = "0.8.11"
-ArrayInterface = "7.15.0"
-DiffEqBase = "6.169.1"
-DiffEqDevTools = "2.44.4"
-Enzyme = "0.13"
-FastBroadcast = "0.3.5"
+NonlinearSolve = "4"
 ForwardDiff = "0.10.36, 1"
-JET = "0.9.18, 0.10.4"
-LinearAlgebra = "<0.0.1, 1"
-LinearSolve = "3"
-MacroTools = "0.5.13"
+Test = "<0.0.1, 1"
+FastBroadcast = "0.3.5"
+Random = "<0.0.1, 1"
+DiffEqDevTools = "2.44.4"
 MuladdMacro = "0.2.4"
-NonlinearSolve = "4"
-ODEProblemLibrary = "0.1.8"
-OrdinaryDiffEqCore = "1.21"
+LinearSolve = "3"
+PrecompileTools = "1.2.1"
+LinearAlgebra = "<0.0.1, 1"
 OrdinaryDiffEqDifferentiation = "1.5"
-OrdinaryDiffEqNonlinearSolve = "1.6"
 OrdinaryDiffEqSDIRK = "1.3"
-PrecompileTools = "1.2.1"
+TruncatedStacktraces = "1.4.0"
+SciMLBase = "2"
+OrdinaryDiffEqCore = "1.21"
+Aqua = "0.8.11"
+ArrayInterface = "7.15.0"
+Enzyme = "0.13"
 Preferences = "1.4.3"
-Random = "<0.0.1, 1"
+MacroTools = "0.5.13"
+JET = "0.9.18, 0.10.4"
+StaticArrays = "1.9.7"
+julia = "1.10"
+ADTypes = "1.11"
 RecursiveArrayTools = "3.27.0"
+ODEProblemLibrary = "0.1.8"
+OrdinaryDiffEqNonlinearSolve = "1.6"
+DiffEqBase = "6.169.1"
 Reexport = "1.2.2"
 SafeTestsets = "0.1.0"
-StaticArrays = "1.9.7"
-Test = "<0.0.1, 1"
-TruncatedStacktraces = "1.4.0"
-julia = "1.10"
-
-[extras]
-Aqua = "4c88cf16-eb10-579e-8560-4a9242c79595"
-DiffEqDevTools = "f3b72e0c-5b89-59e1-b016-84e28bfd966d"
-Enzyme = "7da242da-08ed-463a-9acd-ee780be4f1d9"
-ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210"
-JET = "c3a54625-cd67-489e-a8e7-0a5a0ff4e31b"
-LinearSolve = "7ed4a6bd-45f5-4d41-b270-4a48e9bafcae"
-NonlinearSolve = "8913a72c-1f9b-4ce2-8d82-65094dcecaec"
-ODEProblemLibrary = "fdc4e326-1af4-4b90-96e7-779fcce2daa5"
-Random = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"
-SafeTestsets = "1bc83da4-3b8d-516f-aca4-4fe02f6d838f"
-StaticArrays = "90137ffa-7385-5640-81b9-e52037218182"
-Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"
 
 [targets]
 test = ["DiffEqDevTools", "ForwardDiff", "Random", "SafeTestsets", "Test", "ODEProblemLibrary", "NonlinearSolve", "StaticArrays", "Enzyme", "LinearSolve", "JET", "Aqua"]
+
+[sources.OrdinaryDiffEqSDIRK]
+path = "../OrdinaryDiffEqSDIRK"
+
+[sources.OrdinaryDiffEqDifferentiation]
+path = "../OrdinaryDiffEqDifferentiation"
+
+[sources.OrdinaryDiffEqNonlinearSolve]
+path = "../OrdinaryDiffEqNonlinearSolve"
+
+[sources.OrdinaryDiffEqCore]
+path = "../OrdinaryDiffEqCore"

lib/OrdinaryDiffEqBDF/Project.toml

@@ -24,21 +24,25 @@ import OrdinaryDiffEqCore: alg_order, calculate_residuals!,
                            _process_AD_choice
 using OrdinaryDiffEqSDIRK: ImplicitEulerConstantCache, ImplicitEulerCache
 
-using TruncatedStacktraces, MuladdMacro, MacroTools, FastBroadcast, RecursiveArrayTools
+using TruncatedStacktraces: @truncate_stacktrace
+using MuladdMacro: @muladd
+using MacroTools: @capture
+using FastBroadcast: @..
+using RecursiveArrayTools: recursivefill!
 import StaticArrays: SArray, MVector, SVector, @SVector, StaticArray, MMatrix, SA
 using LinearAlgebra: mul!, I
-using ArrayInterface
+import ArrayInterface
+using ArrayInterface: ismutable
 import OrdinaryDiffEqCore
 using OrdinaryDiffEqDifferentiation: UJacobianWrapper
 using OrdinaryDiffEqNonlinearSolve: NLNewton, du_alias_or_new, build_nlsolver,
                                     nlsolve!, nlsolvefail, isnewton, markfirststage!,
                                     set_new_W!, DIRK, compute_step!, COEFFICIENT_MULTISTEP,
                                     NonlinearSolveAlg
-import ADTypes
 import ADTypes: AutoForwardDiff, AutoFiniteDiff, AbstractADType
 
 using Reexport
-@reexport using DiffEqBase
+@reexport using SciMLBase
 
 include("algorithms.jl")
 include("alg_utils.jl")

lib/OrdinaryDiffEqBDF/src/OrdinaryDiffEqBDF.jl

@@ -444,7 +444,7 @@ function QNDF(; max_order::Val{MO} = Val{5}(), chunk_size = Val{0}(),
         extrapolant, kappa, controller, step_limiter!, AD_choice)
 end
 
-TruncatedStacktraces.@truncate_stacktrace QNDF
+@truncate_stacktrace QNDF
 
 @doc BDF_docstring("The second order Modified Extended BDF method,
     which has improved stability properties over the standard BDF.
@@ -549,7 +549,7 @@ function FBDF(; max_order::Val{MO} = Val{5}(), chunk_size = Val{0}(),
         controller, step_limiter!, AD_choice)
 end
 
-TruncatedStacktraces.@truncate_stacktrace FBDF
+@truncate_stacktrace FBDF
 
 """
 QBDF1: Multistep Method
@@ -773,4 +773,4 @@ function DFBDF(; max_order::Val{MO} = Val{5}(), chunk_size = Val{0}(),
         controller, AD_choice)
 end
 
-TruncatedStacktraces.@truncate_stacktrace DFBDF
+@truncate_stacktrace DFBDF