switch build to micromamba

Author: a-r-j

.github/workflows/build.yaml

@@ -23,29 +23,30 @@ jobs:
     strategy:
       matrix:
         python-version: [3.8, 3.9, "3.10", "3.11"]
-        torch: [1.13.0, 2.1.0, 2.2.0, 2.3.0, 2.4.0]
+        torch: [1.13.0, 2.1.0, 2.2.0, 2.3.0, 2.4.0, 2.5.0]
     # https://github.com/marketplace/actions/setup-miniconda#use-a-default-shell
     defaults:
       run:
         shell: bash -l {0}
     steps:
       - name: Checkout repository
         uses: actions/checkout@v3
-        # See: https://github.com/marketplace/actions/setup-miniconda
-      - name: Setup miniconda
-        uses: conda-incubator/setup-miniconda@v3
+        # See: https://github.com/mamba-org/setup-micromamba/tree/main
+      - name: Setup micromamba
+      - uses: mamba-org/setup-micromamba@v2
         with:
-          auto-update-conda: true
-          miniforge-variant: Mambaforge
-          channels: "conda-forge, salilab, pytorch, pyg"
-          python-version: ${{ matrix.python-version }}
-          use-mamba: true
+          micromamba-version: 'latest'
+          init-shell: bash
+          cache-environment: true
+          cache-environment-key: environment-${{ steps.date.outputs.date }}
+          cache-downloads-key: downloads-${{ steps.date.outputs.date }}
+          post-cleanup: 'all'
       - name: Install setuptools
         run: pip install setuptools==69.5.1
       - name: Install Boost 1.7.3 (for DSSP)
-        run: conda install -c anaconda libboost=1.73.0
+        run: mamba install -c anaconda libboost=1.73.0
       - name: Install DSSP
-        run: conda install dssp -c salilab
+        run: mamba install dssp -c salilab
       - name: Install mmseqs
         run: mamba install -c conda-forge -c bioconda mmseqs2
       - name: Install PyTorch (1.13.0)