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< meta name ="viewport " content ="width=device-width, initial-scale=1.0 " />
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- < title > Index — BioSimulators-tellurium 0.1.17 documentation</ title >
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+ < title > Index — BioSimulators-tellurium 0.1.18 documentation</ title >
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< link rel ="stylesheet " type ="text/css " href ="_static/pygments.css " />
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< link rel ="stylesheet " type ="text/css " href ="_static/alabaster.css " />
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< script data-url_root ="./ " id ="documentation_options " src ="_static/documentation_options.js "> </ script >
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< h1 id ="index "> Index</ h1 >
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< div class ="genindex-jumpbox ">
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- < a href ="#B "> < strong > B</ strong > </ a >
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+ < a href ="#A "> < strong > A</ strong > </ a >
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+ | < a href ="#B "> < strong > B</ strong > </ a >
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| < a href ="#C "> < strong > C</ strong > </ a >
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| < a href ="#E "> < strong > E</ strong > </ a >
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| < a href ="#G "> < strong > G</ strong > </ a >
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| < a href ="#M "> < strong > M</ strong > </ a >
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| < a href ="#P "> < strong > P</ strong > </ a >
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+ | < a href ="#R "> < strong > R</ strong > </ a >
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| < a href ="#S "> < strong > S</ strong > </ a >
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| < a href ="#T "> < strong > T</ strong > </ a >
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+ | < a href ="#V "> < strong > V</ strong > </ a >
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</ div >
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+ < h2 id ="A "> A</ h2 >
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+ < table style ="width: 100% " class ="indextable genindextable "> < tr >
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+ < td style ="width: 33%; vertical-align: top; "> < ul >
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+ < li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.data_model.PreprocesssedTask.algorithm_kisao_id "> algorithm_kisao_id (biosimulators_tellurium.data_model.PreprocesssedTask attribute)</ a > , < a href ="source/biosimulators_tellurium.html#id5 "> [1]</ a >
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+
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+ < ul >
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+ < li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.PreprocesssedTask.algorithm_kisao_id "> (biosimulators_tellurium.PreprocesssedTask attribute)</ a > , < a href ="source/biosimulators_tellurium.html#id0 "> [1]</ a >
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+ </ li >
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+ </ ul > </ li >
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+ </ ul > </ td >
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+ </ tr > </ table >
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+
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< h2 id ="B "> B</ h2 >
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< table style ="width: 100% " class ="indextable genindextable "> < tr >
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< td style ="width: 33%; vertical-align: top; "> < ul >
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< li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.data_model.SedmlInterpreter.biosimulators "> biosimulators (biosimulators_tellurium.data_model.SedmlInterpreter attribute)</ a >
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+
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+ < ul >
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+ < li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.SedmlInterpreter.biosimulators "> (biosimulators_tellurium.SedmlInterpreter attribute)</ a >
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</ li >
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+ </ ul > </ li >
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< li >
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biosimulators_tellurium
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@@ -191,7 +210,19 @@ <h2 id="M">M</h2>
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< table style ="width: 100% " class ="indextable genindextable "> < tr >
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< td style ="width: 33%; vertical-align: top; "> < ul >
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< li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.data_model.PlottingEngine.matplotlib "> matplotlib (biosimulators_tellurium.data_model.PlottingEngine attribute)</ a >
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+
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+ < ul >
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+ < li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.PlottingEngine.matplotlib "> (biosimulators_tellurium.PlottingEngine attribute)</ a >
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</ li >
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+ </ ul > </ li >
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+ < li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.data_model.PreprocesssedTask.model_change_target_tellurium_id_map "> model_change_target_tellurium_id_map (biosimulators_tellurium.data_model.PreprocesssedTask attribute)</ a > , < a href ="source/biosimulators_tellurium.html#id6 "> [1]</ a >
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+
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+ < ul >
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+ < li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.PreprocesssedTask.model_change_target_tellurium_id_map "> (biosimulators_tellurium.PreprocesssedTask attribute)</ a > , < a href ="source/biosimulators_tellurium.html#id1 "> [1]</ a >
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+ </ li >
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+ </ ul > </ li >
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+ </ ul > </ td >
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+ < td style ="width: 33%; vertical-align: top; "> < ul >
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< li >
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module
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@@ -212,13 +243,41 @@ <h2 id="P">P</h2>
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< table style ="width: 100% " class ="indextable genindextable "> < tr >
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< td style ="width: 33%; vertical-align: top; "> < ul >
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< li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.data_model.PlottingEngine.plotly "> plotly (biosimulators_tellurium.data_model.PlottingEngine attribute)</ a >
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+
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+ < ul >
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+ < li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.PlottingEngine.plotly "> (biosimulators_tellurium.PlottingEngine attribute)</ a >
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</ li >
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+ </ ul > </ li >
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+ < li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.config.Config.plotting_engine "> plotting_engine (biosimulators_tellurium.config.Config attribute)</ a >
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+ </ li >
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+ < li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.PlottingEngine "> PlottingEngine (class in biosimulators_tellurium)</ a >
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+
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+ < ul >
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+ < li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.data_model.PlottingEngine "> (class in biosimulators_tellurium.data_model)</ a >
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+ </ li >
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+ </ ul > </ li >
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</ ul > </ td >
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< td style ="width: 33%; vertical-align: top; "> < ul >
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- < li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.config.Config.plotting_engine " > plotting_engine ( biosimulators_tellurium.config.Config attribute )</ a >
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+ < li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.core.preprocess_sed_task " > preprocess_sed_task() (in module biosimulators_tellurium.core )</ a >
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</ li >
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- < li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.data_model.PlottingEngine "> PlottingEngine (class in biosimulators_tellurium.data_model)</ a >
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+ < li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.PreprocesssedTask "> PreprocesssedTask (class in biosimulators_tellurium)</ a >
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+
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+ < ul >
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+ < li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.data_model.PreprocesssedTask "> (class in biosimulators_tellurium.data_model)</ a >
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+ </ li >
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+ </ ul > </ li >
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+ </ ul > </ td >
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+ </ tr > </ table >
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+
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+ < h2 id ="R "> R</ h2 >
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+ < table style ="width: 100% " class ="indextable genindextable "> < tr >
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+ < td style ="width: 33%; vertical-align: top; "> < ul >
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+ < li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.data_model.PreprocesssedTask.road_runner "> road_runner (biosimulators_tellurium.data_model.PreprocesssedTask attribute)</ a > , < a href ="source/biosimulators_tellurium.html#id7 "> [1]</ a >
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+
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+ < ul >
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+ < li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.PreprocesssedTask.road_runner "> (biosimulators_tellurium.PreprocesssedTask attribute)</ a > , < a href ="source/biosimulators_tellurium.html#id2 "> [1]</ a >
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</ li >
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+ </ ul > </ li >
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</ ul > </ td >
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</ tr > </ table >
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@@ -227,18 +286,44 @@ <h2 id="S">S</h2>
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< td style ="width: 33%; vertical-align: top; "> < ul >
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< li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.config.Config.sedml_interpreter "> sedml_interpreter (biosimulators_tellurium.config.Config attribute)</ a >
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</ li >
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+ < li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.SedmlInterpreter "> SedmlInterpreter (class in biosimulators_tellurium)</ a >
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+
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+ < ul >
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+ < li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.data_model.SedmlInterpreter "> (class in biosimulators_tellurium.data_model)</ a >
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+ </ li >
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+ </ ul > </ li >
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</ ul > </ td >
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< td style ="width: 33%; vertical-align: top; "> < ul >
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- < li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.data_model.SedmlInterpreter "> SedmlInterpreter (class in biosimulators_tellurium.data_model)</ a >
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+ < li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.data_model.PreprocesssedTask.solver "> solver (biosimulators_tellurium.data_model.PreprocesssedTask attribute)</ a > , < a href ="source/biosimulators_tellurium.html#id8 "> [1]</ a >
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+
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+ < ul >
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+ < li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.PreprocesssedTask.solver "> (biosimulators_tellurium.PreprocesssedTask attribute)</ a > , < a href ="source/biosimulators_tellurium.html#id3 "> [1]</ a >
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</ li >
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+ </ ul > </ li >
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</ ul > </ td >
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</ tr > </ table >
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< h2 id ="T "> T</ h2 >
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< table style ="width: 100% " class ="indextable genindextable "> < tr >
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< td style ="width: 33%; vertical-align: top; "> < ul >
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< li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.data_model.SedmlInterpreter.tellurium "> tellurium (biosimulators_tellurium.data_model.SedmlInterpreter attribute)</ a >
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+
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+ < ul >
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+ < li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.SedmlInterpreter.tellurium "> (biosimulators_tellurium.SedmlInterpreter attribute)</ a >
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</ li >
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+ </ ul > </ li >
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+ </ ul > </ td >
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+ </ tr > </ table >
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+
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+ < h2 id ="V "> V</ h2 >
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+ < table style ="width: 100% " class ="indextable genindextable "> < tr >
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+ < td style ="width: 33%; vertical-align: top; "> < ul >
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+ < li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.data_model.PreprocesssedTask.variable_target_tellurium_observable_map "> variable_target_tellurium_observable_map (biosimulators_tellurium.data_model.PreprocesssedTask attribute)</ a > , < a href ="source/biosimulators_tellurium.html#id9 "> [1]</ a >
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+
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+ < ul >
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+ < li > < a href ="source/biosimulators_tellurium.html#biosimulators_tellurium.PreprocesssedTask.variable_target_tellurium_observable_map "> (biosimulators_tellurium.PreprocesssedTask attribute)</ a > , < a href ="source/biosimulators_tellurium.html#id4 "> [1]</ a >
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+ </ li >
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+ </ ul > </ li >
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</ ul > </ td >
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</ tr > </ table >
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