Skip to content

Ruffus installation error (ModuleNotFoundError: No module named 'task') #128

@Aditya-Gautam20

Description

@Aditya-Gautam20

Hello ,
I was able to install version 2.8.4 ,but I am trying to install Ruffus 2.4.1 , which is a mandatory version in Kronos_pipeline , i get this error , task not found , i see the that task.py is present and the functions to be imported are all present , can someone help with this .Below is the full error.

/ruffus-2.4.1$ pip install ruffus==2.4.1 --upgrade
Collecting ruffus==2.4.1
Using cached ruffus-2.4.1.tar.gz (92 kB)
Preparing metadata (setup.py) ... error
error: subprocess-exited-with-error

× python setup.py egg_info did not run successfully.
│ exit code: 1
╰─> [8 lines of output]
Traceback (most recent call last):
File "", line 2, in
File "", line 34, in
File "/tmp/pip-install-vug5vl6o/ruffus_56d1596ba79341fb8c56b74de1d3c109/setup.py", line 12, in
import ruffus.ruffus_version
File "/tmp/pip-install-vug5vl6o/ruffus_56d1596ba79341fb8c56b74de1d3c109/ruffus/init.py", line 29, in
from task import pipeline_printout, pipeline_printout_graph, pipeline_run, register_cleanup, check_if_uptodate, active_if, split, transform, merge, collate, files, files_re, follows, parallel, stderr_logger, black_hole_logger, suffix, regex, inputs, add_inputs, touch_file, combine, mkdir, output_from, posttask, JobSignalledBreak, runtime_parameter, jobs_limit, formatter, subdivide, originate
ModuleNotFoundError: No module named 'task'
[end of output]

note: This error originates from a subprocess, and is likely not a problem with pip.
error: metadata-generation-failed

× Encountered error while generating package metadata.
╰─> See above for output.

note: This is an issue with the package mentioned above, not pip.
hint: See above for details.

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Type

    No type

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions