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- FROM rocker/shiny:3.6.1
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+ FROM rocker/shiny:4.0.0
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LABEL maintainer="Sangram Keshari Sahu <sangramsahu15@gmail.com>"
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RUN apt-get update &&\
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apt-get install libxml2-dev libssl-dev -y
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RUN R -e 'install.packages(c("remotes","BiocManager"))' \
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- && R -e 'BiocManager::install(version = "3.10 ")'
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+ && R -e 'BiocManager::install(version = "3.11 ")'
Original file line number Diff line number Diff line change @@ -16,15 +16,16 @@ Anyway this [codingene/bioshiner] made on top of [rocker/shiny] only and loosely
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## Principles
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* Image tags will represnt corresponding [ Bioconductor relese versions]
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- For example to use `Bioconductor 3.10 `
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+ For example to use `Bioconductor 3.11 `
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```
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- docker pull codingene/bioshiner:3.10
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+ docker pull codingene/bioshiner:3.11
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```
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## All Tags
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- | image | Bioc-Version |
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- | -------| ------|
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- | codingene/bioshiner:3.10 | Bioconductor:3.10 |
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+ | image | Bioc-Version | R-Version |
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+ | -------| ------| ------|
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+ | codingene/bioshiner:3.10 | Bioconductor:3.10 | R:3.6.1 |
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+ | codingene/bioshiner:3.11 | Bioconductor:3.11 | R:4.0.0 |
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## Test
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Clone this repository containing test app
@@ -37,7 +38,7 @@ Run the app
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docker run --rm -p 3838:3838 \
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-v ${PWD}/BioShineR/test/apps/biocmanager:/srv/shiny-server/ \
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-v /srv/shinylog/:/var/log/shiny-server/ \
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- codingene/bioshiner:3.10
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+ codingene/bioshiner:3.11
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```
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Open the app in browser: http://localhost:3838/
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