docs: update version number, add custom pkgdown index

Author: ethanbass

DESCRIPTION

@@ -1,6 +1,6 @@
 Package: chromConverter
 Title: Chromatographic File Converter
-Version: 0.7.6
+Version: 0.8.0
 Authors@R: c(
     person(given = "Ethan", family = "Bass", email = "ethanbass@gmail.com",
                   role = c("aut", "cre"),

README.md

@@ -170,6 +170,6 @@ Contributions of source code, ideas, or documentation are always welcome. Please
 
 You can cite chromConverter as follows:
 
-Bass, E. (2024). chromConverter: Chromatographic File Converter. http://doi.org/10.5281/zenodo.6792521.
+Bass, E. (2025). chromConverter: Chromatographic File Converter. http://doi.org/10.5281/zenodo.6792521.
 
 If you use external libraries to convert your files, it is suggested to also cite these libraries in published work.

_pkgdown.yml

@@ -1,4 +1,43 @@
 url: https://ethanbass.github.io/chromConverter/
 template:
   bootstrap: 5
-  
+reference:
+- title: "Core functions"
+  contents: 
+  - read_chroms
+  - read_peaklist
+  - extract_metadata
+  - write_chroms
+- title: "Agilent parsers"
+  contents: 
+  - starts_with("read_agilent")
+  - starts_with("read_chemstation")
+- title: "Shimadzu parsers"
+  contents:
+  - starts_with("read_shimadzu")
+  - starts_with("read_sz")
+- title: "Waters parsers"
+  contents:
+  - starts_with("read_waters")
+- title: "Other miscellaneous parsers"
+  contents:
+  - read_asm
+  - read_cdf
+  - read_chromeleon
+  - read_mdf
+  - read_mzml
+  - read_varian_sms
+  - read_varian_peaklist
+- title: "Bindings to external parsers"
+  contents:
+  - call_entab
+  - call_openchrom
+  - configure_openchrom
+  - read_thermoraw
+  - call_rainbow
+  - sp_converter
+  - uv_converter
+- title: "Write functions"
+  contents:
+  - write_andi_chrom
+  - write_mzml

inst/CITATION

@@ -4,11 +4,11 @@ bibentry(
   bibtype    = "manual",
   title    = "chromConverter: Chromatographic File Converter",
   author   = "Ethan Bass",
-  year     = "2024",
-  version  = "version 0.7.6",
+  year     = "2025",
+  version  = "version 0.8.0",
   doi      = "10.5281/zenodo.6792521",
   url      = "https://ethanbass.github.io/chromConverter/",
-  textVersion = paste("Bass, E. (2024).",
+  textVersion = paste("Bass, E. (2025).",
         "chromConverter: Chromatographic File Converter.",
         "http://doi.org/10.5281/zenodo.6792521.")
 )