chore: Bump pyo3 to 0.25 (#1166)

Bump pyo3 to 0.25. Closes #1164

Author: kylebarron

Cargo.lock

@@ -54,11 +54,11 @@ geos = { version = "10", features = ["v3_10_0"] }
 geozero = "0.14"
 indexmap = "2.5.0"
 num-traits = "0.2.19"
-numpy = "0.24"
+numpy = "0.25"
 object_store = "0.12"
 parquet = { version = "55", default-features = false }
-pyo3 = "0.24"
-pyo3-arrow = "0.9"
+pyo3 = "0.25"
+pyo3-arrow = "0.10.1"
 pyo3-geoarrow = { path = "rust/pyo3-geoarrow" }
 rstar = "0.12.2"
 serde = "1"

Cargo.toml

@@ -26,11 +26,11 @@ geoarrow-schema = { path = "../rust/geoarrow-schema" }
 geoparquet = { path = "../rust/geoparquet" }
 geozero = "0.14"
 indexmap = "2.5.0"
-numpy = "0.24"
+numpy = "0.25"
 object_store = "0.12"
 parquet = "55"
-pyo3 = { version = "0.24", features = ["hashbrown", "serde", "anyhow"] }
-pyo3-arrow = "0.9"
+pyo3 = { version = "0.25", features = ["hashbrown", "serde", "anyhow"] }
+pyo3-arrow = "0.10.1"
 pyo3-geoarrow = { path = "../rust/pyo3-geoarrow" }
 serde_json = "1"
 thiserror = "1"

python/Cargo.lock

@@ -45,11 +45,9 @@ object_store = { workspace = true, features = [
 parquet = { workspace = true }
 pyo3 = { workspace = true }
 pyo3-arrow = { workspace = true }
-# pyo3-file = "0.11"
-# https://github.com/omerbenamram/pyo3-file/pull/28
-pyo3-file = { git = "https://github.com/kylebarron/pyo3-file", rev = "bf4f282d8dbd50c659ff8c91487440e425f58e6e" }
+pyo3-file = "0.13"
 pyo3-geoarrow = { workspace = true }
-pyo3-async-runtimes = { version = "0.24", features = [
+pyo3-async-runtimes = { version = "0.25", features = [
     "tokio-runtime",
 ], optional = true }
 geo = "0.30"
@@ -58,7 +56,7 @@ geoarrow-array = { workspace = true }
 geoarrow-flatgeobuf = { workspace = true }
 geoarrow-schema = { workspace = true }
 geoparquet = { workspace = true, features = ["compression"] }
-pyo3-object_store = { version = "0.2", optional = true }
+pyo3-object_store = { version = "0.5", optional = true }
 serde_json = { workspace = true }
 sqlx = { version = "0.7", default-features = false, features = [
     "postgres",