From 52c77be3cb9c0b8dc37c602614fc7cca82790248 Mon Sep 17 00:00:00 2001 From: Valentin Gauthier Date: Fri, 5 Jul 2024 04:09:22 +0200 Subject: [PATCH 1/2] scriptify --- .envsample | 3 + .gitignore | 16 +- README.md | 92 +- config/sample.yml | 11 + etpclient/etp/h5_handler.py | 10 + etpclient/etp/requester.py | 207 +++-- etpclient/etp/runner.py | 240 +++++ etpclient/etp/serverprotocols.py | 211 +++-- etpclient/main.py | 726 +++++++-------- etpclient/rest_client.py | 324 +++++++ etpclient/scripter.py | 428 +++++++++ etpclient/server_config.py | 102 +++ etpclient/utils.py | 11 + etpclient/websocket_manager.py | 199 ++-- poetry.lock | 1455 +++++++++++++++--------------- pyproject.toml | 7 + 16 files changed, 2640 insertions(+), 1402 deletions(-) create mode 100644 .envsample create mode 100644 config/sample.yml create mode 100644 etpclient/etp/runner.py create mode 100644 etpclient/rest_client.py create mode 100644 etpclient/scripter.py create mode 100644 etpclient/server_config.py diff --git a/.envsample b/.envsample new file mode 100644 index 0000000..14729c4 --- /dev/null +++ b/.envsample @@ -0,0 +1,3 @@ +INI_FILE_PATH=config/sample.yml +CLIENT_ID=XXX +CLIENT_SECRET=XXX \ No newline at end of file diff --git a/.gitignore b/.gitignore index 437deef..45e75b4 100644 --- a/.gitignore +++ b/.gitignore @@ -1,3 +1,4 @@ +.idea __pycache__ .python-version .tox @@ -18,13 +19,20 @@ dist *.sublime-project *.sublime-workspace venv/ -manip -test-data/ -manip.txt demos/ *.epc *.h5 *.xml *.txt output* -*.log \ No newline at end of file +*.log + +.env +config/*_.yml +config/*_.yaml + + +downloads +manip +test-data/ +manip.txt \ No newline at end of file diff --git a/README.md b/README.md index 50c0bd9..61b16e7 100644 --- a/README.md +++ b/README.md @@ -24,22 +24,64 @@ poetry update poetry install ``` +## Connection to a server : + +You must fill a configuration file (see. config/sample.yml): +```yaml +url: wss://XXX +port: 80 +username: XXX +password: XXX +additional-headers: + - data-partition-id: osdu + +token-url: https://XXX +token-grant-type: client_credentials +token-scope: openid profile email +token-refresh_token: XXX +``` + +Then you must set an environment variable to refer it : **INI_FILE_PATH**. +Or you can fill a .env file : +```dotenv +INI_FILE_PATH=config/sample.yml +CLIENT_ID=XXX +CLIENT_SECRET=XXX +``` + ## Sample commands : +### Interactive client : + ```bash -poetry run python client --host RDDMS_HOST --port 9002 -t MY_TOKEN +poetry run client +``` -poetry run python client --host MY_HOST --port 80 --sub-path etp -t MY_TOKEN -poetry run python client --host 127.0.0.1 --port 17000 --sub-path etp --username login --password passwordTest +### Run a specific script (here *download_xmls* that downloads all xml from a server) : +```bash +poetry run script download_xmls +``` -poetry run python client --host 127.0.0.1 --port 5432 --username testerlogin --password passwordtester +### Run a pre-written script : +```bash +poetry run file_script .\script_sample.txt +``` +Example of a script file : +```bash +getresources eml:/// + +# a commented line, a line starting with a '#' will not be executed + +getdataspaces + +quit ``` ## ETP supported commands : -When the client is connected you can send your request. +When the *interactive* client is connected you can send your request (this commands are the same for the *script files*). This is the help menu : ```bash @@ -47,23 +89,37 @@ This is the help menu : [XXX=Y] : replace XXX with your value, default is Y [[XXX]] : optional parameter -Help : show this menu +[URI] for dataspaces can sometimes be set as "eml:///dataspace('DATASPACE_NAME')" but also with only the DATASPACE_NAME. + + Help : show this menu + + Quit : hard quit (no CloseSession sent) + CloseSession : close this session + + Authorize [ [TOKEN] | ( [USERNAME] [PASSWORD]) ] + RequestSession + + GetDataArrayMetadata [URI] [PATH_IN_RESOURCE] + GetDataArray [URI] [PATH_IN_RESOURCE] + GetDataSubArray [URI] [PATH_IN_RESOURCE] [START] [COUNT] + PutDataArray [DATASPACE_NAME] [EPC_FILE_PATH] [H5_FILE_PATH] [[UUIDS]]* + PutDataArray_filter [DATASPACE_NAME] [EPC_FILE_PATH] [H5_FILE_PATH] [[REGEX_TYPE_FILTER]] + + GetDataObject [URI_1] [...] [URI_N] + DeleteDataObjects [URI_1] [...] [URI_N] + PutDataObject [FILE_PATH] [[DATASPACE_NAME]] [[UUIDS]]* -Quit : hard quit (no CloseSession sent) -CloseSession : close this session + GetResources [[uri=eml:/// or notUri=DataspaceName]] [[depth=1]] [[SCOPE]] + GetDeletedResources [[uri=eml:/// or notUri=DataspaceName]] [[DELETE_TIME_FILTER]] [[DATA_OBJECT_TYPES]]* -GetDataArrayMetadata [URI] [PATH_IN_RESOURCE] -GetDataArray [URI] [PATH_IN_RESOURCE] -GetDataSubArray [URI] [PATH_IN_RESOURCE] [START] [COUNT] -PutDataArray [[UUIDS]]* [DATASPACE_NAME] [EPC_FILE_PATH] [H5_FILE_PATH] + GetDataspaces + PutDataspace [NAME] + DeleteDataspace [NAME]* -GetDataObject [URI_1] [...] [URI_N] -PutDataObject [FILE_PATH] [[DATASPACE_NAME]] -GetResources [[uri=eml:/// or notUri=DataspaceName]] [[depth=1]] [[SCOPE]] + Download [OUTPUT_FILE_PATH] [DATASPACE_NAME] + DownloadObject [OUTPUT_FOLDER_PATH] [URI] -GetDataspaces -PutDataspace [NAME] -DeleteDataspace [NAME] + GetSupportedTypes [URI] [[COUNT=True]] [[RETURN_EMPTY_TYPES=True]] [[SCOPE=Self]] ``` ## Configuration diff --git a/config/sample.yml b/config/sample.yml new file mode 100644 index 0000000..ee0753e --- /dev/null +++ b/config/sample.yml @@ -0,0 +1,11 @@ +url: wss://XXX +port: 80 +username: XXX +password: XXX +additional-headers: + - data-partition-id: osdu + +token-url: https://XXX +token-grant-type: client_credentials +token-scope: openid profile email +token-refresh_token: \ No newline at end of file diff --git a/etpclient/etp/h5_handler.py b/etpclient/etp/h5_handler.py index 6225580..25ae828 100644 --- a/etpclient/etp/h5_handler.py +++ b/etpclient/etp/h5_handler.py @@ -2,7 +2,10 @@ # Copyright (c) 2022-2023 Geosiris. # SPDX-License-Identifier: Apache-2.0 # +from typing import Dict + import h5py +import numpy as np from etpclient.utils import ( search_all_element_value, @@ -82,3 +85,10 @@ def generate_put_data_arrays( # res.append(h5_search_dataset(h5_file_path, path_in_hdf)) return res + + +def write_h5(h5_path: str, arrays: Dict): + with h5py.File(h5_path, "a") as f: + for d_name, d_array in arrays.items(): + dset = f.create_dataset(d_name, d_array.shape, d_array.dtype) + dset[()] = d_array diff --git a/etpclient/etp/requester.py b/etpclient/etp/requester.py index 4213e8f..e7cf6d9 100644 --- a/etpclient/etp/requester.py +++ b/etpclient/etp/requester.py @@ -2,8 +2,17 @@ # Copyright (c) 2022-2023 Geosiris. # SPDX-License-Identifier: Apache-2.0 # +import os import re +import zipfile from zipfile import ZipFile + +import h5py +import numpy as np +from etptypes.energistics.etp.v12.datatypes.any_array import AnyArray +from etptypes.energistics.etp.v12.datatypes.data_array_types.put_data_subarrays_type import PutDataSubarraysType +from etptypes.energistics.etp.v12.protocol.data_array.get_data_arrays_response import GetDataArraysResponse +from etptypes.energistics.etp.v12.protocol.data_array.put_data_subarrays import PutDataSubarrays from lxml import etree from io import BytesIO @@ -80,7 +89,10 @@ from etptypes.energistics.etp.v12.datatypes.object.data_object import ( DataObject, ) - +from etptypes.energistics.etp.v12.protocol.core.authorize_response import ( + AuthorizeResponse, +) +from etptypes.energistics.etp.v12.protocol.core.authorize import Authorize from etptypes.energistics.etp.v12.datatypes.data_array_types.data_array_identifier import ( DataArrayIdentifier, ) @@ -118,6 +130,7 @@ from etpproto.uri import parse_uri from etpclient.etp.h5_handler import generate_put_data_arrays +from etpclient.utils import basic_auth_encode, basic_auth_header, get_xml_dict_from_string, search_all_element_value from etpclient.utils import ( xml_get_type, @@ -167,6 +180,12 @@ def energyml_xpath(tree: Element, xpath: str) -> Optional[list]: role="store", protocolCapabilities={}, ), + SupportedProtocol( + protocol=CommunicationProtocol.DATA_ARRAY.value, + protocolVersion=etp_version, + role="store", + protocolCapabilities={}, + ), ] supported_objects = [ @@ -229,7 +248,7 @@ def get_root_type_in_xml(xml_content: bytes) -> str: def request_session(): - return RequestSession( + rq = RequestSession( applicationName="Geosiris etp client", applicationVersion="0.0.1", clientInstanceId=uuid.uuid4(), @@ -241,6 +260,8 @@ def request_session(): endpointCapabilities={}, earliest_retained_change_time=0, ) + print(rq) + return rq def get_scope(scope: str): @@ -259,7 +280,21 @@ def get_scope(scope: str): return ContextScopeKind.SELF -def get_resouces(uri: str = "eml:///", depth: int = 1, scope=None): +def authorize_basic(username: str, password: str): + return Authorize( + authorization=f"Basic {basic_auth_encode(username, password)}", + supplemental_authorization={}, + ) + + +def authorize_bearer(token: str): + return Authorize( + authorization=f"Bearer {token}", + supplemental_authorization={}, + ) + + +def get_resouces(uri: str = "eml:///", depth: int = 1, scope=None, data_object_types: Optional[List[str]] = []): if uri is not None: if not uri.startswith("eml:///"): uri = f"eml:///dataspace('{uri}')" @@ -269,7 +304,7 @@ def get_resouces(uri: str = "eml:///", depth: int = 1, scope=None): context=ContextInfo( uri=uri, depth=depth, - dataObjectTypes=[], + dataObjectTypes=data_object_types, navigableEdges=RelationshipKind.PRIMARY, ), scope=get_scope(scope), @@ -284,8 +319,8 @@ def get_dataspaces(): return GetDataspaces() -async def extractResqmlUuid(content: str): - return await findUuid(content) +def extractResqmlUuid(content: str): + return findUuid(content) XML_TYPE_REGXP = r"<([\w]+:)?([\w]+)" @@ -297,17 +332,17 @@ def extractResqmlURI(content: str, dataspace_name: str = None): result = pattern.search(content) # print("result ", result) return ( - "eml:///" - + ( - "dataspace('" + dataspace_name + "')/" - if dataspace_name is not None - else "" - ) - + "resqml20." - + result.group(2) - + "(" - + extractResqmlUuid(content) - + ")" + "eml:///" + + ( + "dataspace('" + dataspace_name + "')/" + if dataspace_name is not None + else "" + ) + + "resqml20." + + result.group(2) + + "(" + + extractResqmlUuid(content) + + ")" ) @@ -347,9 +382,9 @@ def delete_data_object(uris: list): def get_deleted_resources( - dataspace_names: str, - delete_time_filter: int = None, - data_object_types: list = [], + dataspace_names: str, + delete_time_filter: int = None, + data_object_types: list = [], ): ds_uri = ( "eml:///dataspace('" + dataspace_names + "')" @@ -364,7 +399,7 @@ def get_deleted_resources( def put_data_object_by_path( - path: str, dataspace_name: str = None, uuids_filter: list = None + path: str, dataspace_name: str = None, uuids_filter: list = None ): result = [] # try: @@ -388,9 +423,9 @@ def put_data_object_by_path( uuid = find_uuid_in_xml(file_content) print(f"UUID {uuid}") if uuid is not None and ( - uuids_filter is None - or len(uuids_filter) == 0 - or uuid in uuids_filter + uuids_filter is None + or len(uuids_filter) == 0 + or uuid in uuids_filter ): do_lst[len(do_lst)] = _create_data_object( file_content.decode("utf-8"), @@ -468,10 +503,10 @@ def get_close_session(reason="We have finished"): def get_supported_types( - uri: str, - count: bool = True, - return_empty_types: bool = True, - scope: str = "self", + uri: str, + count: bool = True, + return_empty_types: bool = True, + scope: str = "self", ): if not uri.startswith("eml:///"): uri = f"eml:///dataspace('{uri}')" @@ -506,8 +541,23 @@ def get_data_array_metadata(uri: str, path_in_res: str): ) +def put_data_sub_array( + uri: str, path_in_hdf, data: AnyArray, starts: List, counts: List +): + return PutDataSubarrays( + data_subarrays={ + "0": PutDataSubarraysType( + uid=DataArrayIdentifier(uri=uri, path_in_resource=path_in_hdf), + data=data, + starts=starts, + counts=counts, + ) + } + ) + + def get_data_array( - uri: str, path_in_res: str, start: int = None, count: int = None + uri: str, path_in_res: str, start: int = None, count: int = None ): if start is not None and count is not None: return GetDataSubarrays( @@ -530,10 +580,10 @@ def get_data_array( def put_data_array( - uuids_filter: list, - epc_or_xml_file_path: str, - h5_file_path: str, - dataspace_name: str, + uuids_filter: list, + epc_or_xml_file_path: str, + h5_file_path: str, + dataspace_name: str, ): print("FILE ", epc_or_xml_file_path) result = [] @@ -541,14 +591,14 @@ def put_data_array( zfile = zipfile.ZipFile(epc_or_xml_file_path, "r") for zinfo in zfile.infolist(): if ( - zinfo.filename.endswith(".xml") - and findUuid(zinfo.filename) is not None + zinfo.filename.endswith(".xml") + and findUuid(zinfo.filename) is not None ): uuid = findUuid(zinfo.filename) if ( - uuids_filter is None - or len(uuids_filter) == 0 - or uuid in uuids_filter + uuids_filter is None + or len(uuids_filter) == 0 + or uuid in uuids_filter ): print("> Uuid filtered: ", uuid) # with zfile.open(zinfo.filename) as myfile: @@ -570,12 +620,12 @@ def put_data_array( async def put_data_array_sender( - websocket, - uuids_filter: list, - epc_or_xml_file_path: str, - h5_file_path: str, - dataspace_name: str, - type_filter: str = None, + websocket, + uuids_filter: list, + epc_or_xml_file_path: str, + h5_file_path: str, + dataspace_name: str, + type_filter: str = None, ): print( f"uuids_filter : {uuids_filter} epc_or_xml_file_path : {epc_or_xml_file_path} h5_file_path : {h5_file_path} dataspace_name : {dataspace_name} type_filter : {type_filter} " @@ -584,14 +634,14 @@ async def put_data_array_sender( zfile = zipfile.ZipFile(epc_or_xml_file_path, "r") for zinfo in zfile.infolist(): if ( - zinfo.filename.endswith(".xml") - and findUuid(zinfo.filename) is not None + zinfo.filename.endswith(".xml") + and findUuid(zinfo.filename) is not None ): uuid = findUuid(zinfo.filename) accept_file = ( - uuids_filter is None - or len(uuids_filter) == 0 - or uuid in uuids_filter + uuids_filter is None + or len(uuids_filter) == 0 + or uuid in uuids_filter ) if type_filter is not None: with zfile.open(zinfo.filename) as myfile: @@ -607,9 +657,9 @@ async def put_data_array_sender( print(" > accept_file Uuid : ", uuid) with zfile.open(zinfo.filename) as myfile: for pda in generate_put_data_arrays( - myfile.read().decode("utf-8"), - h5_file_path, - dataspace_name, + myfile.read().decode("utf-8"), + h5_file_path, + dataspace_name, ): # print(type(pda), pda) try: @@ -623,7 +673,7 @@ async def put_data_array_sender( else: with open(epc_or_xml_file_path) as f: for pda in generate_put_data_arrays( - f.read().decode("utf-8"), h5_file_path, dataspace_name + f.read().decode("utf-8"), h5_file_path, dataspace_name ): try: yield await websocket.send_no_wait(pda) @@ -632,7 +682,7 @@ async def put_data_array_sender( async def download_dataspace( - ws, output_file_path: str, dataspace_name: str = None + ws, output_file_path: str, dataspace_name: str = None ): get_res = get_resouces(uri=dataspace_name, depth=1, scope="sources") result_get_res = await ws.send_and_wait(get_res) @@ -681,3 +731,52 @@ async def download_dataspace( xml_file.write(do.data) else: print(f"Not a dataobject :{type(msg.body)} : {msg.body}") + + +async def download_xml_and_h5( + ws, output_folder: str, uri: str +): + try: + os.mkdir(output_folder) + except: + pass + etp_uri = parse_uri(uri) + xml_path = f"{output_folder}/{etp_uri.uuid}.xml" + h5_path = f"{output_folder}/{etp_uri.uuid}.h5" + + result_get_do = [] + get_do = get_data_object([uri], format="xml") + result_get_do = result_get_do + await ws.send_and_wait(get_do) + + with ZipFile(xml_path, "a") as zip_file: + for msg in result_get_do: + if isinstance(msg.body, GetDataObjectsResponse): + for _id, do in msg.body.data_objects.items(): + obj_uri = parse_uri(do.resource.uri) + obj_path = f"{obj_uri.object_type}_{obj_uri.uuid}.xml" + print(f"Storing file : {obj_path}") + with zip_file.open(obj_path, "w") as xml_file: + xml_file.write(do.data) + await download_h5(ws, uri, h5_path, do.data) + else: + print(f"Not a dataObject :{type(msg.body)} : {msg.body}") + + +async def download_h5(ws, uri: str, output_file_path: str, energyml_xml: Union[str, bytes]): + if isinstance(energyml_xml, bytes): + energyml_xml = energyml_xml.decode("utf-8") + + obj_dict = get_xml_dict_from_string(energyml_xml) + + for path_in_hdf in search_all_element_value( + obj_dict, "PathInExternalFile" + ) + search_all_element_value(obj_dict, "PathInHdfFile"): + print(f"Downloading : {uri} {path_in_hdf}") + get_da = get_data_array(uri, path_in_hdf) + get_da_resp = await ws.send_and_wait(get_da) + + if isinstance(get_da_resp[0].body, GetDataArraysResponse): + gdar: GetDataArraysResponse = get_da_resp[0].body + da = list(gdar.data_arrays.values())[0] + with h5py.File(output_file_path, "a") as f: + f[path_in_hdf] = np.array(da.data.item.values).reshape(*da.dimensions) diff --git a/etpclient/etp/runner.py b/etpclient/etp/runner.py new file mode 100644 index 0000000..4e80fb3 --- /dev/null +++ b/etpclient/etp/runner.py @@ -0,0 +1,240 @@ +# +# Copyright (c) 2022-2023 Geosiris. +# SPDX-License-Identifier: Apache-2.0 +# +import argparse +import json +import pprint +import time +from typing import Callable + +import requests + +from etpclient.etp.requester import * +from etpclient.rest_client import get_token_from_config +from etpclient.server_config import * +from etpclient.websocket_manager import WebSocketManager + +pretty_p = pprint.PrettyPrinter(width=80) # , compact=True) + + +def helper(): + print("############") + print("# HELPER #") + print("############") + print( + """[XXX] : replace XXX with your value +[XXX=Y] : replace XXX with your value, default is Y +[[XXX]] : optional parameter + +[URI] for dataspaces can sometimes be set as "eml:///dataspace('DATASPACE_NAME')" but also with only the DATASPACE_NAME. + + Help : show this menu + + Quit : hard quit (no CloseSession sent) + CloseSession : close this session + + Authorize [ [TOKEN] | ( [USERNAME] [PASSWORD]) ] + RequestSession + + GetDataArrayMetadata [URI] [PATH_IN_RESOURCE] + GetDataArray [URI] [PATH_IN_RESOURCE] + GetDataSubArray [URI] [PATH_IN_RESOURCE] [START] [COUNT] + PutDataArray [DATASPACE_NAME] [EPC_FILE_PATH] [H5_FILE_PATH] [[UUIDS]]* + PutDataArray_filter [DATASPACE_NAME] [EPC_FILE_PATH] [H5_FILE_PATH] [[REGEX_TYPE_FILTER]] + + GetDataObject [URI_1] [...] [URI_N] + DeleteDataObjects [URI_1] [...] [URI_N] + PutDataObject [FILE_PATH] [[DATASPACE_NAME]] [[UUIDS]]* + + GetResources [[uri=eml:/// or notUri=DataspaceName]] [[depth=1]] [[SCOPE]] + GetDeletedResources [[uri=eml:/// or notUri=DataspaceName]] [[DELETE_TIME_FILTER]] [[DATA_OBJECT_TYPES]]* + + GetDataspaces + PutDataspace [NAME] + DeleteDataspace [NAME]* + + Download [OUTPUT_FILE_PATH] [DATASPACE_NAME] + + GetSupportedTypes [URI] [[COUNT=True]] [[RETURN_EMPTY_TYPES=True]] [[SCOPE=Self]] +""" + ) + + +def wait_symbol(nb): + if nb % 4 == 0: + return "|" + elif nb % 4 == 1: + return "/" + elif nb % 4 == 2: + return "-" + elif nb % 4 == 3: + return "\\" + + +def get_verified_url(url: str, prefix: list[str] = ["http://", "https://"]): + for p in prefix: + if url.lower().startswith(p.lower()): + return url + + return prefix[0] + url + + +def get_token(get_token_url: str): + if get_token_url is not None: + result = requests.post(get_verified_url(get_token_url)) + try: + return result.json()["token"] + except: + print("=====", result.text) + logging.error(result) + return None + + +def end_message(reason: str = None): + print("1) Bye bye") + + +def get_parser(): + parser = argparse.ArgumentParser() + # parser.add_argument( + # "--host", + # # required=True, + # default="localhost", + # type=str, + # help="[Required] Server host (e.g. localhost or ip like XXX.XXX.XXX.XXX)", + # ) + # parser.add_argument( + # "--port", type=int, default=None, help="Server port" + # ) + # parser.add_argument( + # "--sub-path", + # type=str, + # help='Server sub-path (e.g. "etp" for an url like : "geosiris.com/etp/")', + # ) + # parser.add_argument( + # "--username", "-u", type=str, help="The user login" + # ) + # parser.add_argument( + # "--password", "-p", type=str, help="The user password" + # ) + # parser.add_argument( + # "--token-url", type=str, help="The server get token url" + # ) + # parser.add_argument("--token", "-t", type=str, help="An access token") + parser.add_argument( + "--caps", action="store_true", help="print http capabilities" + ) + return parser + + +async def client( + run_func: Callable, + config: ServerConfig, + # serv_url=None, + # serv_port=None, + # serv_sub_path=None, + # serv_username=None, + # serv_password=None, + # serv_get_token_url=None, + # serv_token=None, + server_capabilities=False, +): + serv_uri = config.get(SERVER_URL) + serv_token = config.get(SERVER_TOKEN) + serv_username = config.get(SERVER_USERNAME) + serv_password = config.get(SERVER_PASSWORD) + + print(f"serv_uri {serv_uri} serv_token {serv_token} serv_username {serv_username} serv_password {serv_password}") + + headers = {} + if serv_token is not None: + headers["Authorization"] = "Bearer " + serv_token + elif serv_token is not None: + headers["Authorization"] = basic_auth_encode(serv_username, serv_password) + + if server_capabilities: + serv_uri_http = serv_uri.split("://")[-1] + serv_uri_http_caps_version = serv_uri_http + ('/' if not serv_uri_http.endswith('/') else '') + ".well-known/etp-server-capabilities?GetVersions=true" + serv_uri_http_caps_value = serv_uri_http + ('/' if not serv_uri_http.endswith('/') else '') + ".well-known/etp-server-capabilities?GetVersion=" + ETPConnection.SUB_PROTOCOL + + print("Trying to contact server '" + str(serv_uri) + "'") + print( + "======> SERVER CAPS Test if contains :", + ETPConnection.SUB_PROTOCOL, + ) + _url_caps = "http://" + serv_uri_http_caps_version + print(f"Trying to reach : {_url_caps}") + req_result = None + try: + req_result = requests.get(_url_caps, timeout=0.5, headers=headers) + pretty_p.pprint(json.loads(req_result.text)) + # assert ETPConnection.SUB_PROTOCOL in json.loads(server_caps_list_txt) + except: + try: + print(f"\tFailed, {req_result}, try with https: ") + _url_caps = "https://" + serv_uri_http_caps_version + req_result = requests.get(_url_caps, timeout=0.5, headers=headers) + pretty_p.pprint(json.loads(req_result.text)) + except Exception as e: + # print(e) + print(f"req result: {req_result}") + # raise e + print("Failed to recover server caps version") + + print("======> SERVER CAPS :") + _url_caps = "http://" + serv_uri_http_caps_value + print(f"Trying to reach : {_url_caps}") + try: + req_result = requests.get(_url_caps, timeout=0.5, headers=headers) + pretty_p.pprint(json.loads(req_result.text)) + print("<====== SERVER CAPS\n") + except: + try: + print(f"\tFailed, {req_result} try with https:") + _url_caps = "https://" + serv_uri_http_caps_value + req_result = requests.get(_url_caps, timeout=0.5, headers=headers) + pretty_p.pprint(json.loads(req_result.text)) + except Exception as e: + # print(e) + print(f"req result: {req_result}") + # raise e + print("Failed to recover server caps version") + + serv_uri_ws = serv_uri + if "://" not in serv_uri_ws: + serv_uri_ws = "ws://" + serv_uri + + wsm = WebSocketManager( + serv_uri_ws, + username=serv_username, + password=serv_password, + token=serv_token or get_token_from_config(config), + additional_headers={} or config.get_headers() + ) + + cpt_wait = 0 + time_step = 0.01 + while ( + not wsm.is_connected() + and not wsm.closed + and (cpt_wait * time_step < 30) + ): + if (cpt_wait * 1000 % 1000) < 2: + print(f"\rwait for connection {wait_symbol(cpt_wait)}", end="") + cpt_wait = cpt_wait + 1 + time.sleep(time_step) + + running = wsm.is_connected() + + if not running and (cpt_wait * time_step >= 30): + print("Timeout...") + + result = None + + while running: + running = await run_func(wsm) + if not wsm.is_connected(): + running = False + + end_message() diff --git a/etpclient/etp/serverprotocols.py b/etpclient/etp/serverprotocols.py index ba2d5d2..61730d3 100644 --- a/etpclient/etp/serverprotocols.py +++ b/etpclient/etp/serverprotocols.py @@ -9,6 +9,7 @@ import lxml.etree as etree import json +from etpproto.error import NotSupportedError from etpproto.messages import Message from etptypes.energistics.etp.v12.datatypes.message_header import MessageHeader @@ -64,6 +65,10 @@ from etptypes.energistics.etp.v12.protocol.core.request_session import ( RequestSession, ) +from etptypes.energistics.etp.v12.protocol.core.authorize_response import ( + AuthorizeResponse, +) +from etptypes.energistics.etp.v12.protocol.core.authorize import Authorize from etptypes.energistics.etp.v12.protocol.data_array.get_data_array_metadata import ( GetDataArrayMetadata, ) @@ -172,30 +177,45 @@ # \____/\____/_/ \___/ / .___/_/ \____/\__/\____/\___/\____/_/ # /_/ +__ENABLE__LOGS__ = True + + +def enable_logs(v: bool): + global __ENABLE__LOGS__ + __ENABLE__LOGS__ = v + + +def log(*args, pretty: bool = False, **kwargs): + if __ENABLE__LOGS__: + if pretty: + pretty_p.pprint(*args, **kwargs) + else: + print(*args, **kwargs) + def print_resource(res: Resource): - print("Resource :", res.uri) - print("\tSource count :", res.source_count) - print("\tTarget count :", res.target_count) - # print("\tLast change :", datetime.fromtimestamp(res.last_changed)) + log("Resource :", res.uri) + log("\tSource count :", res.source_count) + log("\tTarget count :", res.target_count) + # log("\tLast change :", datetime.fromtimestamp(res.last_changed)) def print_dataspace(res: Dataspace): - print("Dataspace :", res.uri) - print("\tStore last write :", res.store_last_write) - print("\tStore created :", res.store_created) - print("\tPath :", res.path) - print("\ttCustom data :", res.custom_data) - # print("\tLast change :", datetime.fromtimestamp(res.last_changed)) + log("Dataspace :", res.uri) + log("\tStore last write :", res.store_last_write) + log("\tStore created :", res.store_created) + log("\tPath :", res.path) + log("\ttCustom data :", res.custom_data) + # log("\tLast change :", datetime.fromtimestamp(res.last_changed)) def print_protocol_exception(pe: ProtocolException): if pe.error is not None: - print("Error recieved : " + str(pe)) + log("Error recieved : " + str(pe)) elif len(pe.errors) > 0: - print(f"Errors recieved ({pe.errors}): ") + log(f"Errors recieved ({pe.errors}): ") for code, pe in pe.errors.items(): - print(f"\t{code}) {str(pe)}") + log(f"\t{code}) {str(pe)}") @ETPConnection.on(CommunicationProtocol.CORE) @@ -208,7 +228,7 @@ async def on_open_session( msg_header: MessageHeader, client_info: Union[None, ClientInfo] = None, ) -> AsyncGenerator[bytes, None]: - print("OpenSession recieved") + log("OpenSession recieved") yield async def on_close_session( @@ -217,7 +237,7 @@ async def on_close_session( correlation_id: int, client_info: Union[None, ClientInfo] = None, ) -> AsyncGenerator[bytes, None]: - print(client_info.ip, ": on_close_session") + log(client_info.ip, ": on_close_session") yield async def on_ping( @@ -226,7 +246,7 @@ async def on_ping( correlation_id: int, client_info: Union[None, ClientInfo] = None, ) -> AsyncGenerator[bytes, None]: - print(client_info.ip, ": #Core : Ping recieved") + log(client_info.ip, ": #Core : Ping recieved") yield Message.get_object_message( Pong(currentDateTime=int(datetime.utcnow().timestamp())), correlation_id=correlation_id, @@ -238,7 +258,7 @@ async def on_pong( correlation_id: int, client_info: Union[None, ClientInfo] = None, ) -> AsyncGenerator[bytes, None]: - print(client_info.ip, ": #Core : Pong recieved") + log(client_info.ip, ": #Core : Pong recieved") yield async def on_protocol_exception( @@ -250,6 +270,25 @@ async def on_protocol_exception( print_protocol_exception(msg) yield + async def on_authorize( + self, + msg: Authorize, + msg_header: MessageHeader, + client_info: Union[None, ClientInfo] = None, + ) -> AsyncGenerator[Optional[Message], None]: + yield NotSupportedError().to_etp_message( + correlation_id=msg_header.message_id + ) + + async def on_authorize_response( + self, + msg: AuthorizeResponse, + msg_header: MessageHeader, + client_info: Union[None, ClientInfo] = None, + ) -> AsyncGenerator[Optional[Message], None]: + log(f"AuthorizeResponse {msg.json()}") + yield + # ____ _ ____ __ __ # / __ \(_)_____________ _ _____ _______ __ / __ \_________ / /_____ _________ / / @@ -267,7 +306,7 @@ async def on_get_resources_response( msg_header: MessageHeader, client_info: Union[None, ClientInfo] = None, ) -> AsyncGenerator[bytes, None]: - print( + log( "## myDiscoveryProtocol ## on_get_resources_response : nb[", len(msg.resources), "]", @@ -293,11 +332,11 @@ async def on_get_deleted_resources_response( ) -> AsyncGenerator[Optional[Message], None]: if msg is not None: if len(msg.deleted_resources) > 0: - print(f"Deleted object list ({len(msg.deleted_resources)}) : ") + log(f"Deleted object list ({len(msg.deleted_resources)}) : ") for dr in msg.deleted_resources: - print(f"\t{dr.uri} \tdeleted_time: \t{dr.deleted_time}") + log(f"\t{dr.uri} \tdeleted_time: \t{dr.deleted_time}") else: - print("No deleted resource found for this context") + log("No deleted resource found for this context") yield @@ -307,7 +346,7 @@ async def on_acknowledge( msg_header: MessageHeader, client_info: Union[None, ClientInfo] = None, ) -> AsyncGenerator[Optional[Message], None]: - print(f"Message recieved {msg}") + log(f"Message recieved {msg}") yield @@ -327,10 +366,8 @@ async def on_delete_dataspaces( msg_header: MessageHeader, client_info: Union[None, ClientInfo] = None, ) -> AsyncGenerator[bytes, None]: - print(client_info.ip, ": on_delete_dataspaces") - etpObj, etpErr = await etp_bridge.handle_request(msg, client_info) - yield Message.get_object_message(etpObj, correlation_id=correlation_id) - yield etpErr + log(client_info.ip, ": on_delete_dataspaces") + yield async def on_get_dataspaces( self, @@ -338,10 +375,8 @@ async def on_get_dataspaces( msg_header: MessageHeader, client_info: Union[None, ClientInfo] = None, ) -> AsyncGenerator[bytes, None]: - print(client_info.ip, ": on_get_dataspaces") - etpObj, etpErr = await etp_bridge.handle_request(msg, client_info) - yield Message.get_object_message(etpObj, correlation_id=correlation_id) - yield etpErr + log(client_info.ip, ": on_get_dataspaces") + yield async def on_put_dataspaces( self, @@ -349,10 +384,8 @@ async def on_put_dataspaces( msg_header: MessageHeader, client_info: Union[None, ClientInfo] = None, ) -> AsyncGenerator[bytes, None]: - print(client_info.ip, ": on_put_dataspaces") - etpObj, etpErr = await etp_bridge.handle_request(msg, client_info) - yield Message.get_object_message(etpObj, correlation_id=correlation_id) - yield etpErr + log(client_info.ip, ": on_put_dataspaces") + yield async def on_delete_dataspaces_response( self, @@ -360,7 +393,7 @@ async def on_delete_dataspaces_response( msg_header: MessageHeader, client_info: Union[None, ClientInfo] = None, ) -> AsyncGenerator[bytes, None]: - pretty_p.pprint(msg) + # log(msg, pretty=True) yield # raise NotSupportedError() @@ -381,7 +414,7 @@ async def on_put_dataspaces_response( msg_header: MessageHeader, client_info: Union[None, ClientInfo] = None, ) -> AsyncGenerator[bytes, None]: - pretty_p.pprint(msg) + log(msg, pretty=True) yield # raise NotSupportedError() @@ -411,10 +444,8 @@ async def on_get_data_objects( msg_header: MessageHeader, client_info: Union[None, ClientInfo] = None, ) -> AsyncGenerator[bytes, None]: - print(client_info.ip, ": on_get_data_objects") - etpObj, etpErr = await etp_bridge.handle_request(msg, client_info) - yield Message.get_object_message(etpObj, correlation_id=correlation_id) - yield etpErr + log(client_info.ip, ": on_get_data_objects") + yield async def on_put_data_objects( self, @@ -422,10 +453,8 @@ async def on_put_data_objects( msg_header: MessageHeader, client_info: Union[None, ClientInfo] = None, ) -> AsyncGenerator[bytes, None]: - print(client_info.ip, ": on_put_data_objects") - etpObj, etpErr = await etp_bridge.handle_request(msg, client_info) - yield Message.get_object_message(etpObj, correlation_id=correlation_id) - yield etpErr + log(client_info.ip, ": on_put_data_objects") + yield async def on_delete_data_objects( self, @@ -433,10 +462,8 @@ async def on_delete_data_objects( msg_header: MessageHeader, client_info: Union[None, ClientInfo] = None, ) -> AsyncGenerator[bytes, None]: - print(client_info.ip, ": on_delete_data_objects") - etpObj, etpErr = await etp_bridge.handle_request(msg, client_info) - yield Message.get_object_message(etpObj, correlation_id=correlation_id) - yield etpErr + log(client_info.ip, ": on_delete_data_objects") + yield async def on_get_data_objects_response( self, @@ -444,20 +471,20 @@ async def on_get_data_objects_response( msg_header: MessageHeader, client_info: Union[None, ClientInfo] = None, ) -> AsyncGenerator[bytes, None]: - print("# on_get_data_objects_response") - # pretty_p.pprint(msg) + log("# on_get_data_objects_response") + # log(msg, pretty=True) for do in msg.data_objects.values(): form = do.format_.lower() try: if form == "xml": - print(do.data.decode("utf-8")) + log(do.data.decode("utf-8")) elif form == "json": json.dumps( json.loads(do.data.data.decode("utf-8")), indent=4 ) except Exception as e: - print("\n\n=============", e, "\n") - pretty_p.pprint(do) + log("\n\n=============", e, "\n") + log(do, pretty=True) yield @@ -467,9 +494,9 @@ async def on_put_data_objects_response( msg_header: MessageHeader, client_info: Union[None, ClientInfo] = None, ) -> AsyncGenerator[bytes, None]: - print(f"Success {len(msg.success)}:") + log(f"Success {len(msg.success)}:") for code, pr in msg.success.items(): - print(f"\t{code}) {str(pr.created_contained_object_uris)}") + log(f"\t{code}) {str(pr.created_contained_object_uris)}") yield async def on_delete_data_objects_response( @@ -478,9 +505,9 @@ async def on_delete_data_objects_response( msg_header: MessageHeader, client_info: Union[None, ClientInfo] = None, ) -> AsyncGenerator[Optional[Message], None]: - print(f"Deletion success {len(msg.deleted_uris)}:") + log(f"Deletion success {len(msg.deleted_uris)}:") for code, aos in msg.deleted_uris.items(): - print(f"\t{code}) {str(aos)}") + log(f"\t{code}) {str(aos)}") yield async def on_protocol_exception( @@ -511,10 +538,8 @@ async def on_get_data_array_metadata( msg_header: MessageHeader, client_info: Union[None, ClientInfo] = None, ) -> AsyncGenerator[bytes, None]: - print(client_info.ip, ": on_get_data_array_metadata") - etpObj, etpErr = myDataArrayHandler.hsdsbridge.handle_metadata(msg) - yield Message.get_object_message(etpObj, correlation_id=correlation_id) - yield etpErr + log(client_info.ip, ": on_get_data_array_metadata") + yield async def on_get_data_array_metadata_response( self, @@ -522,7 +547,7 @@ async def on_get_data_array_metadata_response( msg_header: MessageHeader, client_info: Union[None, ClientInfo] = None, ) -> AsyncGenerator[Optional[Message], None]: - print(client_info.ip, msg) + log(client_info.ip, msg) yield async def on_get_data_arrays( @@ -531,10 +556,8 @@ async def on_get_data_arrays( msg_header: MessageHeader, client_info: Union[None, ClientInfo] = None, ) -> AsyncGenerator[bytes, None]: - print(client_info.ip, ": on_get_data_arrays") - etpObj, etpErr = myDataArrayHandler.hsdsbridge.send_request(msg) - yield Message.get_object_message(etpObj, correlation_id=correlation_id) - yield etpErr + log(client_info.ip, ": on_get_data_arrays") + yield async def on_get_data_subarrays( self, @@ -542,10 +565,8 @@ async def on_get_data_subarrays( msg_header: MessageHeader, client_info: Union[None, ClientInfo] = None, ) -> AsyncGenerator[bytes, None]: - print(client_info.ip, ": on_get_data_subarrays") - etpObj, etpErr = myDataArrayHandler.hsdsbridge.send_request(msg) - yield Message.get_object_message(etpObj, correlation_id=correlation_id) - yield etpErr + log(client_info.ip, ": on_get_data_subarrays") + yield async def on_get_data_arrays_response( self, @@ -553,7 +574,7 @@ async def on_get_data_arrays_response( msg_header: MessageHeader, client_info: Union[None, ClientInfo] = None, ) -> AsyncGenerator[Optional[Message], None]: - print(client_info.ip, msg) + log(client_info.ip, msg) yield async def on_get_data_subarrays_response( @@ -562,7 +583,7 @@ async def on_get_data_subarrays_response( msg_header: MessageHeader, client_info: Union[None, ClientInfo] = None, ) -> AsyncGenerator[Optional[Message], None]: - print(client_info.ip, msg) + log(client_info.ip, msg) yield async def on_put_data_arrays( @@ -571,9 +592,9 @@ async def on_put_data_arrays( msg_header: MessageHeader, client_info: Union[None, ClientInfo] = None, ) -> AsyncGenerator[bytes, None]: - print(client_info.ip, ": on_put_data_arrays") + log(client_info.ip, ": on_put_data_arrays") etpObj, etpErr = myDataArrayHandler.hsdsbridge.send_request(msg) - yield Message.get_object_message(etpObj, correlation_id=correlation_id) + yield Message.get_object_message(etpObj, correlation_id=msg_header.message_id) yield etpErr async def on_put_data_arrays_response( @@ -582,7 +603,7 @@ async def on_put_data_arrays_response( msg_header: MessageHeader, client_info: Union[None, ClientInfo] = None, ) -> AsyncGenerator[Optional[Message], None]: - print(client_info.ip, msg) + log(client_info.ip, msg) yield async def on_protocol_exception( @@ -611,7 +632,7 @@ async def on_get_supported_types( msg_header: MessageHeader, client_info: Union[None, ClientInfo] = None, ) -> AsyncGenerator[bytes, None]: - print(client_info.ip, ": on_get_supported_types") + log(client_info.ip, ": on_get_supported_types") yield async def on_get_supported_types_response( @@ -621,7 +642,7 @@ async def on_get_supported_types_response( client_info: Union[None, ClientInfo] = None, ) -> AsyncGenerator[bytes, None]: for st in msg.supported_types: - print(f"\t{st.data_object_type}\t count : {str(st.object_count)}") + log(f"\t{st.data_object_type}\t count : {str(st.object_count)}") yield async def on_protocol_exception( @@ -647,7 +668,7 @@ async def on_protocol_exception( def computeCapability(supportedProtocolList_fun) -> ServerCapabilities: protocolDict = supportedProtocolList_fun() - # pretty_p.pprint(protocolDict) + # log(protocolDict, pretty=True) return ServerCapabilities( application_name="etpproto", @@ -684,30 +705,30 @@ def computeCapability(supportedProtocolList_fun) -> ServerCapabilities: # "SupportsGet": DataValue(item=True), # }, # ), - # SupportedDataObject( - # qualified_type="resqml20.*", - # data_object_capabilities={ - # "SupportsDelete": DataValue(item=True), - # "SupportsPut": DataValue(item=True), - # "SupportsGet": DataValue(item=True), - # }, - # ), SupportedDataObject( - qualified_type="witsml20.*", - data_object_capabilities={ - "SupportsDelete": DataValue(item=True), - "SupportsPut": DataValue(item=True), - "SupportsGet": DataValue(item=True), - }, - ), - SupportedDataObject( - qualified_type="witsml21.*", + qualified_type="resqml20.*", data_object_capabilities={ "SupportsDelete": DataValue(item=True), "SupportsPut": DataValue(item=True), "SupportsGet": DataValue(item=True), }, ), + # SupportedDataObject( + # qualified_type="witsml20.*", + # data_object_capabilities={ + # "SupportsDelete": DataValue(item=True), + # "SupportsPut": DataValue(item=True), + # "SupportsGet": DataValue(item=True), + # }, + # ), + # SupportedDataObject( + # qualified_type="witsml21.*", + # data_object_capabilities={ + # "SupportsDelete": DataValue(item=True), + # "SupportsPut": DataValue(item=True), + # "SupportsGet": DataValue(item=True), + # }, + # ), ], # supported_compression=["gzip"], supported_formats=["xml"], diff --git a/etpclient/main.py b/etpclient/main.py index 7415a12..38942b9 100644 --- a/etpclient/main.py +++ b/etpclient/main.py @@ -2,19 +2,16 @@ # Copyright (c) 2022-2023 Geosiris. # SPDX-License-Identifier: Apache-2.0 # -import logging -import requests import asyncio -import time -import json -import argparse +import logging import pprint -from etpproto.connection import ETPConnection +from dotenv import load_dotenv -from etpclient.websocket_manager import WebSocketManager from etpclient.etp.requester import * - +from etpclient.etp.runner import client, get_parser +from etpclient.server_config import ServerConfig +from etpclient.websocket_manager import WebSocketManager pretty_p = pprint.PrettyPrinter(width=80) # , compact=True) @@ -35,6 +32,9 @@ def helper(): Quit : hard quit (no CloseSession sent) CloseSession : close this session + Authorize [ [TOKEN] | ( [USERNAME] [PASSWORD]) ] + RequestSession + GetDataArrayMetadata [URI] [PATH_IN_RESOURCE] GetDataArray [URI] [PATH_IN_RESOURCE] GetDataSubArray [URI] [PATH_IN_RESOURCE] [START] [COUNT] @@ -52,414 +52,337 @@ def helper(): PutDataspace [NAME] DeleteDataspace [NAME]* - Download [OUTPU_FILE_PATH] [DATASPACE_NAME] + Download [OUTPUT_FILE_PATH] [DATASPACE_NAME] + DownloadObject [OUTPUT_FOLDER_PATH] [URI] GetSupportedTypes [URI] [[COUNT=True]] [[RETURN_EMPTY_TYPES=True]] [[SCOPE=Self]] """ ) -def wait_symbol(nb): - if nb % 4 == 0: - return "|" - elif nb % 4 == 1: - return "/" - elif nb % 4 == 2: - return "-" - elif nb % 4 == 3: - return "\\" - - -def get_verified_url(url: str, prefix: list[str] = ["http://", "https://"]): - for p in prefix: - if url.lower().startswith(p.lower()): - return url - - return prefix[0] + url - - -def get_token(get_token_url: str): - if get_token_url: - return requests.get(get_verified_url(get_token_url)).json()["token"] - return None - - -def end_message(reason: str = None): - print("1) Bye bye") +async def launch_command(wsm: WebSocketManager, cmd: str) -> bool: + args = list(filter(lambda x: len(x) > 0, cmd.split(" "))) + command = args[0].lower() + command_params = args[1:] if len(args) > 1 else [] + + if command == "quit": + return False + elif command.startswith("help"): + helper() + elif command.startswith("getresource"): + result = await wsm.send_and_wait( + get_resouces( + command_params[0] + if len(command_params) > 0 + else "eml:///", + int(command_params[1]) + if len(command_params) > 1 + else 1, + command_params[2] if len(command_params) > 2 else None, + command_params[3:] if len(command_params) > 3 else [], + ) + ) + if result: + pretty_p.pprint(result) + pass + else: + print("No answer...") + + elif command.startswith("requestsession"): + result = await wsm.send_and_wait(request_session()) + if result: + pretty_p.pprint(result) + pass + else: + print("No answer...") + + elif command.startswith("authorize"): + authorize_msg = None + if len(command_params) == 1: + authorize_msg = authorize_bearer(command_params[0]) + elif len(command_params) == 2: + print("Basic auth") + authorize_msg = authorize_basic(command_params[0], command_params[1]) + + if authorize_msg is not None: + result = await wsm.send_and_wait(authorize_msg) + if result: + pretty_p.pprint(result) + pass + else: + print("No answer...") + elif command.startswith("putdataobject"): + uuid_list = [] + print("args ", command_params, "\n>> ", cmd) + if len(command_params) > 2: + uuid_list = command_params[2:] + for putDataObj in put_data_object_by_path( + path=command_params[0], + dataspace_name=command_params[1] if len(command_params) > 1 else None, + uuids_filter=uuid_list, + ): + result = await wsm.send_no_wait(putDataObj) + if result: + pretty_p.pprint(result) + pass + else: + print("No answer...") + elif command.startswith("getdataarraymetadata"): + if len(command_params) < 2: + print( + "Usage : GetDataArrayMetadata [URI] [PATH_IN_RESOURCES]" + ) + else: + print(f"===> {command_params}\n") + get_data_arr = get_data_array_metadata( + command_params[0], command_params[1] + ) + print(f"\n\n{get_data_arr}\n\n") -async def client( - serv_url=None, - serv_port=None, - serv_sub_path=None, - serv_username=None, - serv_password=None, - serv_get_token_url=None, - serv_token=None, - http_reqs=False, -): - serv_uri = ( - str(serv_url) - + (":" + str(serv_port) if serv_port else "") - + ("/" + serv_sub_path + "/" if serv_sub_path else "") - ) + result = await wsm.send_no_wait(get_data_arr) + if result: + pretty_p.pprint(result) + pass + else: + print("No answer...") - if http_reqs: - serv_uri_http = "http://" + serv_uri.split("://")[-1] + elif command.startswith("getdataarray") or command.startswith( + "getdatasubarray" + ): + if len(command_params) < 2: + print( + "Usage : GetDataSubArray [URI] [PATH_IN_RESOURCES] [START] [COUNT]" + ) + else: + print(f"===> {command_params}\n") + if len(command_params) > 3: # subArray + get_data_arr = get_data_array( + command_params[0], + command_params[1], + int(command_params[2]), + int(command_params[3]), + ) + else: + get_data_arr = get_data_array( + command_params[0], command_params[1] + ) - print("Trying to contact server '" + str(serv_uri) + "'") - print( - "======> SERVER CAPS Test if contains :", - ETPConnection.SUB_PROTOCOL, - ) - try: - server_caps_list_txt = requests.get( - serv_uri_http - + ".well-known/etp-server-capabilities?GetVersions=true" - ).text - pretty_p.pprint(server_caps_list_txt) - # assert ETPConnection.SUB_PROTOCOL in json.loads(server_caps_list_txt) - except: - print("Failed to recover server caps version") - - print("======> SERVER CAPS :") + print(f"\n\n{get_data_arr}\n\n") + result = await wsm.send_no_wait(get_data_arr) + if result: + pretty_p.pprint(result) + pass + else: + print("No answer...") + + elif command.startswith("getdataobject"): + get_data_obj = get_data_object(command_params) + result = await wsm.send_and_wait(get_data_obj) + if result: + pretty_p.pprint(result) + pass + else: + print("No answer...") + + elif command.startswith("getdataspace"): + result = await wsm.send_and_wait(get_dataspaces()) + if result: + pretty_p.pprint(result) + pass + else: + print("No answer...") + + elif command.startswith("putdataspace"): try: - server_caps_txt = requests.get( - serv_uri_http - + ".well-known/etp-server-capabilities?GetVersion=" - + ETPConnection.SUB_PROTOCOL - ).text - pretty_p.pprint(json.loads(server_caps_txt)) - print("<====== SERVER CAPS\n") - except: - print("Failed to recover server capabilities") - - serv_uri_ws = serv_uri - if "://" not in serv_uri_ws: - serv_uri_ws = "ws://" + serv_uri - - wsm = WebSocketManager( - serv_uri_ws, - username=serv_username, - password=serv_password, - token=get_token(serv_get_token_url) or serv_token, - ) + result = await wsm.send_and_wait( + put_dataspace(command_params) + ) + if result: + pretty_p.pprint(result) + pass + else: + print("No answer...") + except Exception as e: + print(e) - cpt_wait = 0 - time_step = 0.01 - while ( - not wsm.is_connected() - and not wsm.closed - and (cpt_wait * time_step < 30) - ): - if (cpt_wait * 1000 % 1000) < 2: - print(f"\rwait for connection {wait_symbol(cpt_wait)}", end="") - cpt_wait = cpt_wait + 1 - time.sleep(time_step) - - running = wsm.is_connected() - - if not running and (cpt_wait * time_step >= 30): - print("Timeout...") - - result = None - - while running: - a = input("Please write something\n") - - args = list(filter(lambda x: len(x) > 0, a.split(" "))) - - if len(args) > 0: - command = args[0] - command_params = args[1:] - - if a.lower() == "quit": - running = False - elif command.startswith("help"): - helper() - elif command.startswith("getresource"): - result = await wsm.send_and_wait( - get_resouces( - command_params[0] - if len(command_params) > 0 - else "eml:///", - int(command_params[1]) - if len(command_params) > 1 - else 1, - command_params[2] if len(command_params) > 2 else None, - ) + elif "supportedtypes" in command: + try: + print("ARGS ", command_params) + result = await wsm.send_and_wait( + get_supported_types( + uri=command_params[0], + count=True + if len(command_params) < 2 + else command_params[1], + return_empty_types=True + if len(command_params) < 3 + else command_params[2], + scope="Self" + if len(command_params) < 4 + else command_params[3], ) - if result: - pretty_p.pprint(result) - pass - else: - print("No answer...") + ) + if result: + pretty_p.pprint(result) + pass + else: + print("No answer...") + except Exception as e: + print(e) - elif command.startswith("putdataobject"): + elif command.startswith("putdataarray"): + try: + print(f"\n\nCommand is '{cmd}'") + if len(command_params) < 2: + print( + "Not enough paratmeter : need a DATASPACE, an EPC_FILE_PATH and a H5_FILE_PATH" + ) + else: + type_filter = None uuid_list = [] - print("args ", command_params, "\n>> ", a) - if len(command_params) > 2: - uuid_list = command_params[2:] - for putDataObj in put_data_object_by_path( - command_params[0], - command_params[1] if len(command_params) > 2 else None, - uuid_list, - ): - result = await wsm.send_no_wait(putDataObj) - if result: - pretty_p.pprint(result) - pass - else: - print("No answer...") - - elif command.startswith("getdataarraymetadata"): - if len(command_params) < 2: - print( - "Usage : GetDataArrayMetadata [URI] [PATH_IN_RESOURCES]" - ) + if command_params[0].lower().endswith("filter"): + type_filter = command_params[-1] else: - print(f"===> {command_params}\n") - get_data_arr = get_data_array_metadata( - command_params[0], command_params[1] - ) - print(f"\n\n{get_data_arr}\n\n") - - result = await wsm.send_no_wait(get_data_arr) - if result: - pretty_p.pprint(result) - pass - else: - print("No answer...") - - elif command.startswith("getdataarray") or command.startswith( - "getdatasubarray" - ): - if len(command_params) < 2: - print( - "Usage : GetDataSubArray [URI] [PATH_IN_RESOURCES] [START] [COUNT]" + print("UUID") + uuid_list = ( + command_params[3:] + if len(command_params) > 3 + else [] ) - else: - print(f"===> {command_params}\n") - if len(command_params) > 3: # subArray - get_data_arr = get_data_array( - command_params[0], - command_params[1], - int(command_params[2]), - int(command_params[3]), - ) - else: - get_data_arr = get_data_array( - command_params[0], command_params[1] - ) - - print(f"\n\n{get_data_arr}\n\n") - result = await wsm.send_no_wait(get_data_arr) - if result: - pretty_p.pprint(result) - pass - else: - print("No answer...") - - elif command.startswith("getdataobject"): - get_data_obj = get_data_object(command_params) - result = await wsm.send_and_wait(get_data_obj) - if result: - pretty_p.pprint(result) - pass - else: - print("No answer...") + dataspace = command_params[0] + epc_path = command_params[1] + h5_path = command_params[2] + print(command_params) + print( + f"""uuid_list {uuid_list} + epc_path {epc_path} + h5_path {h5_path} + dataspace {dataspace} + type_filter {type_filter}""" + ) - elif command.startswith("getdataspaces"): - result = await wsm.send_and_wait(get_dataspaces()) - if result: - pretty_p.pprint(result) - pass - else: - print("No answer...") + async for msg_idx in put_data_array_sender( + websocket=wsm, + uuids_filter=uuid_list, + epc_or_xml_file_path=epc_path, + h5_file_path=h5_path, + dataspace_name=dataspace, + type_filter=type_filter, + ): + print(msg_idx) - elif command.startswith("putdataspace"): - try: - result = await wsm.send_and_wait( - put_dataspace(command_params) - ) - if result: - pretty_p.pprint(result) - pass - else: - print("No answer...") - except Exception as e: - print(e) - - elif "supportedtypes" in command: - try: - print("ARGS ", command_params) - result = await wsm.send_and_wait( - get_supported_types( - uri=command_params[0], - count=True - if len(command_params) < 2 - else command_params[1], - return_empty_types=True - if len(command_params) < 3 - else command_params[2], - scope="Self" - if len(command_params) < 4 - else command_params[3], - ) - ) - if result: - pretty_p.pprint(result) - pass - else: - print("No answer...") - except Exception as e: - print(e) - - elif command.startswith("putdataarray"): - try: - print(f"\n\nCommand is '{a}'") - if len(command_params) < 2: - print( - "Not enough paratmeter : need a DATASPACE, an EPC_FILE_PATH and a H5_FILE_PATH" - ) - else: - type_filter = None - uuid_list = [] - if command_params[0].lower().endswith("filter"): - type_filter = command_params[-1] - else: - print("UUID") - uuid_list = ( - command_params[3:] - if len(command_params) > 3 - else [] - ) - dataspace = command_params[0] - epc_path = command_params[1] - h5_path = command_params[2] - print(command_params) - print( - f"""uuid_list {uuid_list} - epc_path {epc_path} - h5_path {h5_path} - dataspace {dataspace} - type_filter {type_filter}""" - ) - - async for msg_idx in put_data_array_sender( - websocket=wsm, - uuids_filter=uuid_list, - epc_or_xml_file_path=epc_path, - h5_file_path=h5_path, - dataspace_name=dataspace, - type_filter=type_filter, - ): - print(msg_idx) - - if result: - pretty_p.pprint(result) - pass - else: - print("No answer...") - except Exception as e: - raise e - - elif command.startswith("deletedataobject"): - try: - result = await wsm.send_and_wait( - delete_data_object(command_params) - ) - if result: - pretty_p.pprint(result) - pass - else: - print("No answer...") - except Exception as e: - print(e) - - elif command.startswith("deletedataspace"): - try: - result = await wsm.send_and_wait( - delete_dataspace(command_params) - ) - if result: - pretty_p.pprint(result) - pass - else: - print("No answer...") - except Exception as e: - print(e) - - elif command.startswith("getdeletedresources"): - try: - result = await wsm.send_and_wait( - get_deleted_resources( - dataspace_names=command_params[0], - delete_time_filter=command_params[1] - if len(command_params) > 1 - else None, - data_object_types=command_params[2] - if len(command_params) > 2 - else [], - ) - ) - if result: - pretty_p.pprint(result) - pass - else: - print("No answer...") - except Exception as e: - print(e) - - elif command.startswith("closesession"): - result = await wsm.send_and_wait( - get_close_session( - command_params[0] - if len(command_params) > 0 - else "We have finished" - ) - ) - await asyncio.sleep(1) - elif command == "download": - await download_dataspace( - ws=wsm, - output_file_path=command_params[0], - dataspace_name=command_params[1] + except Exception as e: + raise e + + elif command.startswith("deletedataobject"): + try: + result = await wsm.send_and_wait( + delete_data_object(command_params) + ) + if result: + pretty_p.pprint(result) + pass + else: + print("No answer...") + except Exception as e: + print(e) + + elif command.startswith("deletedataspace"): + try: + result = await wsm.send_and_wait( + delete_dataspace(command_params) + ) + if result: + pretty_p.pprint(result) + pass + else: + print("No answer...") + except Exception as e: + print(e) + + elif command.startswith("getdeletedresources"): + try: + result = await wsm.send_and_wait( + get_deleted_resources( + dataspace_names=command_params[0], + delete_time_filter=command_params[1] if len(command_params) > 1 else None, + data_object_types=command_params[2] + if len(command_params) > 2 + else [], ) + ) + if result: + pretty_p.pprint(result) + pass else: - print(a) + print("No answer...") + except Exception as e: + print(e) + + elif command.startswith("closesession"): + await wsm.send_and_wait( + get_close_session( + command_params[0] + if len(command_params) > 0 + else "We have finished" + ) + ) + await asyncio.sleep(1) + elif command == "download": + await download_dataspace( + ws=wsm, + output_file_path=command_params[0], + dataspace_name=command_params[1] + if len(command_params) > 1 + else None, + ) + elif command == "downloadobject": + await download_xml_and_h5( + ws=wsm, + output_folder=command_params[0], + uri=command_params[1] + ) + elif command == "msg": + await wsm.send_raw(" ".join(command_params).encode("utf-8")) + else: + print(command) + + return True + - if not wsm.is_connected(): - running = False +async def client_ui(wsm: WebSocketManager) -> bool: + a = input("Please write something\n") - end_message() + return await launch_command(wsm=wsm, cmd=a) def main(): + load_dotenv(override=True) logging.basicConfig(filename="etpclient.log", level=logging.DEBUG) - + config = ServerConfig() + print(f"config {config}") + print(f"INI_FILE_PATH {os.environ['INI_FILE_PATH']}") try: loop = asyncio.get_running_loop() except RuntimeError: # 'RuntimeError: There is no current event loop...' loop = None + args = get_parser().parse_args() + if ( - loop and loop.is_running() + loop and loop.is_running() ): # for case that an asyncio loop currently exists print( "Async event loop already running. Adding coroutine to the event loop." ) loop.create_task( - main( - serv_url="localhost", - serv_port=80, - serv_sub_path="", - serv_username="", - serv_password="", - serv_get_token_url="", - serv_token="", + client( + run_func=client_ui, + config=config, + server_capabilities=args.caps, ) ) # ^-- https://docs.python.org/3/library/asyncio-task.html#task-object @@ -470,50 +393,25 @@ def main(): # ) # ) else: - parser = argparse.ArgumentParser() - parser.add_argument( - "--host", - # required=True, - default="localhost", - type=str, - help="[Required] Server host (e.g. localhost or ip like XXX.XXX.XXX.XXX)", - ) - parser.add_argument( - "--port", type=int, default=None, help="Server port" - ) - parser.add_argument( - "--sub-path", - type=str, - help='Server sub-path (e.g. "etp" for an url like : "georisi.com/etp/")', - ) - parser.add_argument( - "--username", "-u", type=str, help="The user login" - ) - parser.add_argument( - "--password", "-p", type=str, help="The user password" - ) - parser.add_argument( - "--token-url", type=str, help="The server get token url" - ) - parser.add_argument("--token", "-t", type=str, help="An access token") - parser.add_argument( - "--caps", action="store_true", help="print http capabilities" - ) - args = parser.parse_args() asyncio.run( client( - serv_url=args.host, - serv_port=args.port, - serv_sub_path=args.sub_path, - serv_username=args.username, - serv_password=args.password, - serv_get_token_url=args.token_url, - serv_token=args.token, - http_reqs=args.caps, + run_func=client_ui, + config=config, + # serv_url=args.host, + # serv_port=args.port, + # serv_sub_path=args.sub_path, + # serv_username=args.username, + # serv_password=args.password, + # serv_get_token_url=args.token_url, + # serv_token=args.token, + server_capabilities=args.caps, ) ) if __name__ == "__main__": + logging.getLogger().setLevel(logging.INFO) + load_dotenv(override=True) main() + # print(ServerConfig().get_config()) diff --git a/etpclient/rest_client.py b/etpclient/rest_client.py new file mode 100644 index 0000000..a0068ee --- /dev/null +++ b/etpclient/rest_client.py @@ -0,0 +1,324 @@ +import os +import re +import traceback +import urllib +from pathlib import Path +from typing import Any, Optional, List + +import numpy as np +import requests +import enum + +from etpproto.uri import parse_uri + +from etpclient.etp.h5_handler import write_h5 +from etpclient.server_config import * +from etpclient.utils import search_all_element_value + + +class HttpMethod(enum.Enum): + DELETE = enum.auto() + GET = enum.auto() + PATCH = enum.auto() + POST = enum.auto() + PUT = enum.auto() + + +class RequestError(Exception): + def __init__(self, message="Failed to send request."): + self.message = message + super().__init__(self.message) + + +def search_h5_paths(obj: dict): + return search_all_element_value(obj, "PathInHdfFile") + search_all_element_value(obj, "PathInExternalFile") + + +def get_token_from_config( + config: ServerConfig, +): + print(config.get_config()) + token_url = config.get(SERVER_TOKEN_URL, None) + if token_url is not None: + return get_token( + url=token_url, + client_id=config.get("CLIENT_ID"), + client_secret=config.get("CLIENT_SECRET"), + headers=config.get_headers(), + scope=config.get(SERVER_TOKEN_SCOPE), + refresh_token=config.get(SERVER_TOKEN_REFRESH_TOKEN), + grant_type=config.get(SERVER_TOKEN_GRANT_TYPE), + ) + + +def get_token( + url: str, + client_id: str, + client_secret: str, + headers: dict, + scope: Optional[str], + refresh_token: Optional[str], + grant_type: Optional[str] = "client_credentials", +): + params = { + "client_id": client_id, + "client_secret": client_secret, + "refresh_token": refresh_token, + "scope": scope, + "grant_type": grant_type, + } + print(f"params {params}") + return EtpRestClient._send_request( + url=url, + method=HttpMethod.POST, + headers=headers, + params=params, + data=params, + ).json()["access_token"] + + +class EtpRestClient: + + def __init__(self, host: str, headers: dict = None, data_partition_id: str = None, bearer_token: str = None): + host = re.sub("ws?://", "http://", host) + host = re.sub("wss?://", "https://", host) + if not host.startswith("http"): + if bearer_token is not None: + host = f"https://{host}" + else: + host = f"http://{host}" + self.host = host + self.headers = headers or {} + if data_partition_id is not None: + self.headers["data-partition-id"] = data_partition_id + self.bearer_token = bearer_token + + # {{RESERVOIR_DDMS_HOST}}/dataspaces + def get_dataspaces(self): + return EtpRestClient.make_request( + method=HttpMethod.GET, + url=f"{self.host}/dataspaces", + add_headers=self.headers, + bearer_token=self.bearer_token, + ) + + # {{RESERVOIR_DDMS_HOST}}/dataspaces/{{DATASPACE_ID}}/resources/all + def get_resources(self, dataspace_id: str): + return EtpRestClient.make_request( + method=HttpMethod.GET, + url=f"{self.host}/dataspaces/{urllib.parse.quote(dataspace_id, safe='')}/resources/all", + add_headers=self.headers, + bearer_token=self.bearer_token, + ) + + # {{RESERVOIR_DDMS_HOST}}/dataspaces/{{DATASPACE_ID}}/resources/{{DATA_OBJECT_TYPE}}/{{DATA_OBJECT_TYPE_GUID}} + def get_dataobject(self, + dataspace_id: str, + data_object_type: str, + data_object_type_guid: str, + format: str = "xml" + ): + url = f"{self.host}/dataspaces/{urllib.parse.quote(dataspace_id, safe='')}/resources/{urllib.parse.quote(data_object_type, safe='')}/{urllib.parse.quote(data_object_type_guid, safe='')}" + print(f"url: {url}") + return EtpRestClient.make_request( + method=HttpMethod.GET, + url=url, + params={"$format": format}, + add_headers=self.headers, + bearer_token=self.bearer_token, + ) + + def get_dataobject_from_uri(self, uri: str, format: str = "xml"): + o_uri = parse_uri(uri) + return self.get_dataobject( + dataspace_id=o_uri.dataspace, + data_object_type=f"{o_uri.domain}{o_uri.domain_version}.{o_uri.object_type}", + data_object_type_guid=o_uri.uuid, + format=format + ) + + def get_dataobject_from_uri_xml(self, uri: str): + return re.sub(r"", "", client.get_dataobject_from_uri(uri=uri, format="xml").text, re.IGNORECASE) + + # {{RESERVOIR_DDMS_HOST}}/dataspaces/{{DATASPACE_ID}}/resources/{{DATA_OBJECT_TYPE}}/{{DATA_OBJECT_TYPE_GUID}}/arrays/{{PATH_IN_RESOURCE}} + def get_dataarray(self, + dataspace_id: str, + data_object_type: str, + data_object_type_guid: str, + path_in_resource: str + ): + url = f"{self.host}/dataspaces/{urllib.parse.quote(dataspace_id, safe='')}/resources/{urllib.parse.quote(data_object_type, safe='')}/{urllib.parse.quote(data_object_type_guid, safe='')}/arrays/{urllib.parse.quote(path_in_resource, safe='')}" + print(f"URL: {url}") + return EtpRestClient.make_request( + method=HttpMethod.GET, + url=url, + add_headers=self.headers, + bearer_token=self.bearer_token, + ) + + def s_download_dataspace(self, dataspace_name: str, output_folder: str, h5_for_each: bool = False, download_h5: bool = True, download_xml: bool = True) -> None: + self.s_download_objects(list(map(lambda x: x['uri'], self.get_resources(dataspace_name).json())), output_folder, h5_for_each, download_h5, download_xml) + + def s_download_objects(self, uris: List[str], output_folder: str, h5_for_each: bool = False, download_h5: bool = True, download_xml: bool = True) -> None: + try: + os.makedirs(output_folder) + except: + pass + uris.reverse() + for uri in uris: + o_uri = parse_uri(uri) + f_path_prefix = f"{output_folder}/{o_uri.domain}{o_uri.domain_version}.{o_uri.object_type}_{o_uri.uuid}" + print(uri) + if download_xml: + data_obj_xml = self.get_dataobject_from_uri_xml(uri=uri) + try: + # p_uri = parse_uri(uri) + f_path = Path(f"{f_path_prefix}.xml") + with f_path.open("w") as _f: + _f.write(data_obj_xml) + except Exception as e: + print(traceback.format_exc()) + # print(f"\t Exception {e}\n\t{data_obj_xml}") + + # for hdf_dataset_path in data_obj_json + # if "TriangulatedSetRepresentation" in uri: + if download_h5 and "Representation" in uri: + data_obj_json = self.get_dataobject_from_uri(uri=uri, format="json").json() + try: + self.s_download_h5_from_uri( + uri=uri, + paths_in_resource=search_h5_paths(data_obj_json), + h5_path=f"{f_path_prefix}.h5" if h5_for_each else f"{output_folder}/{os.path.basename(os.path.normpath(output_folder))}.h5" + ) + except Exception: + print(traceback.format_exc()) + + def s_download_h5_from_uri(self, uri: str, paths_in_resource: List[str], h5_path: str): + o_uri = parse_uri(uri) + return self.s_download_h5( + dataspace_id=o_uri.dataspace, + data_object_type=f"{o_uri.domain}{o_uri.domain_version}.{o_uri.object_type}", + data_object_type_guid=o_uri.uuid, + paths_in_resource=paths_in_resource, + h5_path=h5_path + ) + + def s_download_h5(self, + dataspace_id: str, + data_object_type: str, + data_object_type_guid: str, + paths_in_resource: List[str], + h5_path: str + ): + arrays = {} + if len(paths_in_resource) > 0: + for pir in paths_in_resource: + gda = self.get_dataarray( + dataspace_id=dataspace_id, + data_object_type=data_object_type, + data_object_type_guid=data_object_type_guid, + path_in_resource=pir, + ).json() + try: + array = np.array( + gda['data']['data'] + # dtype=, + ).reshape(tuple(gda['data']['dimensions'])) + arrays[pir] = array + except Exception as e: + print(e) + print(gda['data']['data'][:100]) + print(len(gda['data']['data'])) + print(gda['data']['dimensions']) + if len(arrays) > 0: + write_h5(h5_path=h5_path, arrays=arrays) + + @staticmethod + def _send_request(method: HttpMethod, url: str, data: Optional[str] = None, headers: Optional[dict] = None, + params: Optional[dict] = None) -> requests.Response: + if method == HttpMethod.DELETE: + response = requests.delete(url=url, params=params or {}, headers=headers or {}, verify=False) + elif method == HttpMethod.GET: + response = requests.get(url=url, params=params or {}, headers=headers or {}, verify=False) + elif method == HttpMethod.POST: + response = requests.post(url=url, params=params or {}, data=data, headers=headers or {}, verify=False) + elif method == HttpMethod.PUT: + response = requests.put(url=url, params=params or {}, data=data, headers=headers or {}, verify=False) + return response + + @staticmethod + def _send_request_with_bearer_token( + method: HttpMethod, + url: str, + data: str, + headers: dict, + params: dict, + bearer_token: str, + config: Optional[ServerConfig] = None + ) -> requests.Response: + if bearer_token is not None and 'Bearer ' not in bearer_token: + bearer_token = 'Bearer ' + bearer_token + headers["Authorization"] = bearer_token + + response = EtpRestClient._send_request(method, url, data, headers, params) + if not response.ok: + response.raise_for_status() + + return response + + @staticmethod + def make_request( + method: HttpMethod, + url: str, + data: Any = '', + add_headers: Optional[dict] = None, + params: Optional[dict] = None, + bearer_token: Optional[str] = None, + no_auth: bool = False + ) -> requests.Response: + + add_headers = add_headers or {} + params = params or {} + + headers = { + 'content-type': 'application/json', + } + + for key, value in add_headers.items(): + headers[key] = value + + if no_auth: + response = EtpRestClient._send_request(method, url, data, headers, params) + elif bearer_token: + response = EtpRestClient._send_request_with_bearer_token(method, url, data, headers, params, bearer_token) + # elif cls.token_refresher: + # response = self._send_request_with_token_refresher(headers, method, url, data, params) + else: + raise RequestError() + return response + + +if __name__ == "__main__": + client = EtpRestClient( + host="prsh.testing.preshiptesting.osdu.aws/api/reservoir-ddms/v2", + data_partition_id="osdu", + bearer_token="eyJraWQiOiJ2VDAxeWczNTg4VjJxVHpRRDNKcStNZjErMGJoZjIrS216ejFubjZIK2pZPSIsImFsZyI6IlJTMjU2In0.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.IAXux00Lnq8EKf5T3Pq4s3igRVx1orRZcxCDfGOfi5G_DdvKpmMHUAq5YJ7g4j9kfkY4bgw1EX38MKf24tcIfJVs29Js9E8bvD8ZmAH1fZoMHn7D4bdusFuv0u0h_A6ErItDfxCjVdYJNBW7cmegwEOZquSX4OWCFT997HhRBJkPrwRSf2Lf566G5nMXxQgVT8duw3hJhVecYC4FcebIOBmAgLPaLpA_hHshI7dxQFlwiz0GzFTTy_FmCt3yl25yx4S3jByPp-NQ3M7BqlyYpBch5Q7ow281MYvVpUB_Cz-McNvPZHli_3wdVKbXYzS_0ZUe-2UE2vWueAyeal9goA" + ) + # + # print(client.get_dataspaces().json()) + # obj = client.get_dataobject_from_uri_xml("eml:///dataspace('F2F/Demo')/resqml20.obj_TriangulatedSetRepresentation(0674295b-128e-4470-ae36-f9eaa4b51fe1)") + # print(obj) + # + # print(search_all_element_value(client.get_dataobject_from_uri("eml:///dataspace('F2F/Demo')/resqml20.obj_TriangulatedSetRepresentation(0674295b-128e-4470-ae36-f9eaa4b51fe1)", "json"), "PathInHdfFile")) + # # F2F%2FDemo/resources/resqml20.obj_TriangulatedSetRepresentation/0674295b-128e-4470-ae36-f9eaa4b51fe1/arrays/%2FRESQML%2F0674295b-128e-4470-ae36-f9eaa4b51fe1%2Ftriangles_patch0 + # print(client.get_dataarray( + # "F2F/Demo", + # "resqml20.obj_TriangulatedSetRepresentation", + # "0674295b-128e-4470-ae36-f9eaa4b51fe1", + # "/RESQML/0674295b-128e-4470-ae36-f9eaa4b51fe1/triangles_patch0" + # ).json()) + # + client.s_download_dataspace('F2F/Demo', "out/'F2F_Demo'", False, False, True) + # # client.s_download_objects(["eml:///dataspace('F2F/Demo')/resqml20.obj_TriangulatedSetRepresentation(0674295b-128e-4470-ae36-f9eaa4b51fe1)"], "out") + + # print(os.path.basename(os.path.normpath("out/coucou/test"))) diff --git a/etpclient/scripter.py b/etpclient/scripter.py new file mode 100644 index 0000000..9eb17a0 --- /dev/null +++ b/etpclient/scripter.py @@ -0,0 +1,428 @@ +# +# Copyright (c) 2022-2023 Geosiris. +# SPDX-License-Identifier: Apache-2.0 +# +import asyncio +import logging +import pprint +import sys +from io import StringIO +from pathlib import Path +from typing import TextIO +from urllib.parse import urlparse + +from dotenv import load_dotenv +from etptypes.energistics.etp.v12.datatypes.any_array_type import AnyArrayType +from etptypes.energistics.etp.v12.datatypes.any_logical_array_type import AnyLogicalArrayType +from etptypes.energistics.etp.v12.datatypes.array_of_float import ArrayOfFloat +from etptypes.energistics.etp.v12.datatypes.data_array_types.data_array_metadata import DataArrayMetadata +from etptypes.energistics.etp.v12.datatypes.data_array_types.put_uninitialized_data_array_type import \ + PutUninitializedDataArrayType +from etptypes.energistics.etp.v12.protocol.data_array.put_uninitialized_data_arrays import PutUninitializedDataArrays +from etptypes.energistics.etp.v12.protocol.dataspace.get_dataspaces_response import GetDataspacesResponse + +from etpclient.etp.requester import * +from etpclient.etp.runner import client, get_parser +from etpclient.etp.serverprotocols import enable_logs +from etpclient.main import launch_command +from etpclient.rest_client import get_token_from_config +from etpclient.server_config import ServerConfig, SERVER_URL +from etpclient.websocket_manager import WebSocketManager + +pretty_p = pprint.PrettyPrinter(width=80) # , compact=True) + + +async def script_0(wsm: WebSocketManager): + result = await wsm.send_and_wait(get_dataspaces()) + if result: + pretty_p.pprint(result) + pass + else: + print("No answer...") + return False + + +async def script_clean_fake_ds(wsm: WebSocketManager): + result = await wsm.send_and_wait(get_dataspaces(), timeout=20) + if result: + pretty_p.pprint(result) + else: + print("No answer...") + + if isinstance(result, list): + result = result[0] + + result = result.body + + if isinstance(result, GetDataspacesResponse): + for d in result.dataspaces: + uri = parse_uri(d.uri) + if uri.dataspace.startswith("c-"): + print(f"removing {uri.dataspace}") + result = await wsm.send_and_wait(delete_dataspace([uri.dataspace])) + if result: + pretty_p.pprint(result) + pass + else: + print("No answer...") + + + return False + + +async def download_objects(uris: List[str], wsm: WebSocketManager, output_folder: str=""): + try: + os.makedirs(output_folder) + except: + pass + for uri in uris: + print(uri) + data_obj = await wsm.send_and_wait(get_data_object(uris=[uri])) + try: + # p_uri = parse_uri(uri) + f_path = Path(f"{output_folder}/{uri[7:]}.xml") + if isinstance(data_obj[0].body, GetDataObjectsResponse): + with f_path.open("wb") as _f: + dos = data_obj[0].body.data_objects + _f.write(dos[list(dos.keys())[0]].data) + else: + print(f"\tNot readable : {data_obj[0].body}") + except Exception as e: + print(f"\t Exception {e}\n\t{data_obj}") + + +async def download_dataspace_objects(dataspace_uri: str, wsm: WebSocketManager, output_folder: str=""): + print(f"GetResources on {dataspace_uri}") + dataspaces_objs = await wsm.send_and_wait(get_resouces(uri=dataspace_uri), timeout=60) + if dataspaces_objs is not None: + await download_objects(list(map(lambda r: r.uri, dataspaces_objs[0].body.resources)), wsm, output_folder) + else: + print(f"No data for {dataspace_uri}") + + +async def script_download_server(wsm: WebSocketManager, output_folder: str="downloads", dataspaces: List[str]=[]): + enable_logs(False) + dataspaces_res = await wsm.send_and_wait(get_dataspaces(), timeout=10) + + dataspaces = ["eml:///"] + try: + if isinstance(dataspaces_res, list): + dataspaces = dataspaces + list(map(lambda d: d.uri, dataspaces_res[0].body.dataspaces)) + except: + pass + for d_uri in dataspaces: + p_uri = parse_uri(d_uri) + print(d_uri, p_uri.dataspace) + await download_dataspace_objects(d_uri, wsm, f"{output_folder}/{p_uri.dataspace}") + # for m in dataspaces_res: + # if isinstance(m.body, GetDataspacesResponse): + # for d in m.body.dataspaces: + # p_uri = parse_uri(d.uri) + # print(d.uri, p_uri.dataspace) + # await download_dataspace_objects(d.uri, wsm, f"{output_folder}/{p_uri.dataspace}") + return False + + +async def script_push_testing_package( + wsm: WebSocketManager, + dataspace_name="testing-package", + epc_path="D:/Geosiris/Cloud/Resqml_Tools/2023-DATA/06_FESAPI_RESQML_WITSML_PRODML/testingPackageCpp.epc", + h5_path="D:/Geosiris/Cloud/Resqml_Tools/2023-DATA/06_FESAPI_RESQML_WITSML_PRODML/testingPackageCpp.h5", +): + + print(f"PutDataSpace {dataspace_name}") + result = await wsm.send_and_wait( + put_dataspace([dataspace_name]) + ) + if result: + pretty_p.pprint(result) + pass + else: + print("No answer...") + + for putDataObj in put_data_object_by_path( + path=epc_path, + dataspace_name=dataspace_name, + uuids_filter=[], + ): + result = await wsm.send_no_wait(putDataObj) + if result: + pretty_p.pprint(result) + pass + else: + print("No answer...") + + async for msg_idx in put_data_array_sender( + websocket=wsm, + uuids_filter=[], + epc_or_xml_file_path=epc_path, + h5_file_path=h5_path, + dataspace_name=dataspace_name, + type_filter=None, + ): + print(msg_idx) + + return False + + +async def script_put_sub_array(wsm: WebSocketManager): + # uri = "eml:///resqml22.FakeData(956103f2-1c9f-418e-a9ee-679a26be697b)" + uri = "eml:///dataspace('volve-eqn-plus')/resqml22.TriangulatedSetRepresentation(f3a44228-4f8e-47a7-b999-86f50c3b5857)" + path_in_resource = "RESQML/f3a44228-4f8e-47a7-b999-86f50c3b5857/fake_2" + + # full_data = [ + # "01", "02", "03", "04", "05", "06", "07", "08", "09", + # "11", "12", "13", "14", "15", "16", "17", "18", "19", + # "21", "22", "23", "24", "25", "26", "27", "28", "29" + # ] + full_data = [float(i) for i in range(27)] + dims = [3, 3, 3] + + + # TODO: run a putSubArrayRequest + # PutUninitializedDataArrays + # PutDataSubarrays + print("Sending PutUninitializedDataArrays") + result = await wsm.send_and_wait(PutUninitializedDataArrays( + data_arrays={ + "0": PutUninitializedDataArrayType( + uid=DataArrayIdentifier( + uri=uri, + path_in_resource=path_in_resource, + ), + metadata=DataArrayMetadata( + dimensions=dims, + transport_array_type=AnyArrayType.ARRAY_OF_FLOAT, + # transport_array_type=AnyArrayType.ARRAY_OF_STRING, + logical_array_type=AnyLogicalArrayType.ARRAY_OF_FLOAT32_LE, + # logical_array_type=AnyLogicalArrayType.ARRAY_OF_STRING, + store_last_write=0, + store_created=0, + preferred_subarray_dimensions=[], + custom_data=[], + ) + ) + } + )) + if result: + pretty_p.pprint(result) + pass + else: + print("No answer...") + + print("Sending get_data_array") + result = await wsm.send_and_wait(get_data_array(uri=uri, path_in_res=path_in_resource)) + if result: + pretty_p.pprint(result) + pass + else: + print("No answer...") + + print("Sending PutDataSubarrays (1/3)") + result = await wsm.send_and_wait(PutDataSubarrays( + data_subarrays={ + "0": PutDataSubarraysType( + uid=DataArrayIdentifier( + uri=uri, + path_in_resource=path_in_resource, + ), + data=AnyArray(item=ArrayOfFloat(values=full_data[0:9])), + # data=AnyArray(item=ArrayOfString(values=full_data[0:8])), + starts=[0, 0, 0], + counts=[1, 3, 3], + ) + } + )) + if result: + pretty_p.pprint(result) + pass + else: + print("No answer...") + + print("Sending get_data_array") + result = await wsm.send_and_wait(get_data_array(uri=uri, path_in_res=path_in_resource)) + if result: + pretty_p.pprint(result) + pass + else: + print("No answer...") + + print("Sending PutDataSubarrays (2/3)") + result = await wsm.send_and_wait(PutDataSubarrays( + data_subarrays={ + "0": PutDataSubarraysType( + uid=DataArrayIdentifier( + uri=uri, + path_in_resource=path_in_resource, + ), + data=AnyArray(item=ArrayOfFloat(values=full_data[9:18])), + # data=AnyArray(item=ArrayOfString(values=full_data[0:8])), + starts=[1, 0, 0], + counts=[1, 3, 3], + ) + } + )) + if result: + pretty_p.pprint(result) + pass + else: + print("No answer...") + + print("Sending get_data_array") + result = await wsm.send_and_wait(get_data_array(uri=uri, path_in_res=path_in_resource)) + if result: + pretty_p.pprint(result) + pass + else: + print("No answer...") + + print("Sending PutDataSubarrays (3/3)") + result = await wsm.send_and_wait(PutDataSubarrays( + data_subarrays={ + "0": PutDataSubarraysType( + uid=DataArrayIdentifier( + uri=uri, + path_in_resource=path_in_resource, + ), + data=AnyArray(item=ArrayOfFloat(values=full_data[18:27])), + # data=AnyArray(item=ArrayOfString(values=full_data[0:8])), + starts=[2, 0, 0], + counts=[1, 3, 3], + ) + } + )) + if result: + pretty_p.pprint(result) + pass + else: + print("No answer...") + + print("Sending get_data_array") + result = await wsm.send_and_wait(get_data_array(uri=uri, path_in_res=path_in_resource)) + if result: + pretty_p.pprint(result) + pass + else: + print("No answer...") + + return False + + +# Main functions : + + +def test_put_sub_array(): + load_dotenv(override=True) + config = ServerConfig() + logging.basicConfig(filename="etpclient.log", level=logging.DEBUG) + + args = get_parser().parse_args() + + asyncio.run( + client( + run_func=script_put_sub_array, + config=config, + server_capabilities=args.caps, + ) + ) + + +def download_xmls(): + load_dotenv(override=True) + config = ServerConfig() + logging.basicConfig(filename="etpclient.log", level=logging.DEBUG) + + args = get_parser().parse_args() + + host_name = urlparse(config.get(SERVER_URL)).hostname + + asyncio.run( + client( + run_func=lambda wsm: script_download_server(wsm, output_folder=f"downloads/{host_name}"), + config=config, + server_capabilities=args.caps, + ) + ) + + +def init_gabbro(): + load_dotenv(override=True) + config = ServerConfig() + logging.basicConfig(filename="etpclient.log", level=logging.DEBUG) + + args = get_parser().parse_args() + + host_name = urlparse(args.host).hostname + + asyncio.run( + client( + run_func=script_push_testing_package, + config=config, + server_capabilities=args.caps, + ) + ) + + +async def _file_script_line_reader(wsm: WebSocketManager, fio: TextIO): + line = fio.readline() + + if line is not None: + line = line.strip() + while len(line) > 0 and not line.startswith("#"): + return await launch_command(wsm=wsm, cmd=line) + + if (line is None or len(line) > 0) and wsm.is_connected(): + print("quitting") + return await launch_command(wsm=wsm, cmd="quit") + return True + + +def file_script(f_path: Optional[str]=None): + if f_path is None: + f_path = sys.argv[1] + + print(f"reading {f_path}") + + load_dotenv(override=True) + config = ServerConfig() + logging.basicConfig(filename="etpclient.log", level=logging.DEBUG) + + with open(f_path, "r") as f: + async def _consumer(wsm): + return await _file_script_line_reader(wsm=wsm, fio=f) + asyncio.run( + client( + run_func=_consumer, + config=config, + server_capabilities=False, + ) + ) + + +def main(): + load_dotenv(override=True) + config = ServerConfig() + logging.basicConfig(filename="etpclient.log", level=logging.DEBUG) + + args = get_parser().parse_args() + + host_name = urlparse(args.host).hostname + + asyncio.run( + client( + # run_func=script_0, + run_func=script_clean_fake_ds, + config=config, + server_capabilities=args.caps, + ) + ) + + +if __name__ == "__main__": + f_name = sys.argv.pop(1) + print(sys.argv) + print(f_name) + load_dotenv(override=True) + config = ServerConfig() + # print(get_token_from_config(config)) + globals()[f_name]() diff --git a/etpclient/server_config.py b/etpclient/server_config.py new file mode 100644 index 0000000..7243d6c --- /dev/null +++ b/etpclient/server_config.py @@ -0,0 +1,102 @@ +# +# Copyright (c) 2022-2023 Geosiris. +# SPDX-License-Identifier: Apache-2.0 +# +import configparser +import logging +import os +from typing import Optional, Any + +import yaml + + +INI_FILE_PATH = "INI_FILE_PATH" + +SERVER_URL = "url" +SERVER_USERNAME = "username" +SERVER_PASSWORD = "password" +SERVER_ADDITIONAL_HEADERS = "additional-headers" +SERVER_TOKEN = "token" +SERVER_TOKEN_URL = "token-url" +SERVER_TOKEN_GRANT_TYPE = "token-grant-type" +SERVER_TOKEN_SCOPE = "token-scope" +SERVER_TOKEN_REFRESH_TOKEN = "token-refresh_token" + + +def replace_env_templates(value: Any): + if isinstance(value, str): + res = str(value) + for k, v in os.environ.items(): + res = res.replace("${{" + k + "}}", v) + return res + elif isinstance(value, list): + return [ + replace_env_templates(iv) + for iv in value + ] + elif isinstance(value, dict): + return { + k: replace_env_templates(v) + for k, v in value.items() + } + else: + return value + + +class ServerConfig: + _config: dict + _config_path: str + + def __init__(self, config_path: Optional[str] = None): + self._config = {} + self._config_parser = None + self._config_path = config_path + if config_path is None: + self._config_path = os.environ.get(INI_FILE_PATH) + + try: + + if self._config_path.lower().endswith(".ini"): + self._config_parser = configparser.ConfigParser(os.environ) + self._config_parser.read(self._config_path) + else: + with open(self._config_path) as yaml_file: + config = yaml.safe_load(yaml_file) + self._config = {} + for k in config: + self[k] = config[k] + except IOError as e: + logging.error("File not found " + str(self._config_path)) + raise e + except Exception as e: + logging.exception(e) + + def __contains__(self, key): + return key in self._config + + def __getitem__(self, key): + res = None + if key in self._config: + res = self._config[key] + elif self._config_parser is not None: + res = self._config_parser.get( + section="environment", + option=key, + fallback=os.environ[key] if key in os.environ else None, + ) + + if res is None and key in os.environ: + res = os.environ[key] + return replace_env_templates(res) + + def __setitem__(self, key, new_value): + self._config[key] = new_value + + def get(self, key, default=None): + return self[key] or default + + def get_config(self) -> dict: + return replace_env_templates(self._config) + + def get_headers(self): + return {k: v for h in self.get(SERVER_ADDITIONAL_HEADERS, []) for k, v in h.items()} diff --git a/etpclient/utils.py b/etpclient/utils.py index 0a01ad6..cd16d00 100644 --- a/etpclient/utils.py +++ b/etpclient/utils.py @@ -4,8 +4,19 @@ # import re from lxml import etree +from base64 import b64encode +def basic_auth_encode(username: str, password: str): + assert ":" not in username + user_pass = f"{username}:{password}" + return b64encode(user_pass.encode()).decode() + +def basic_auth_header(username: str, password: str): + basic_credentials = basic_auth_encode(username, password) + print("Credentials : 'Basic " + basic_credentials + "'") + return "authorization: Basic " + basic_credentials + def get_class_attributes(cls): att_and_type_list = [] props = cls.schema() diff --git a/etpclient/websocket_manager.py b/etpclient/websocket_manager.py index a3293a7..6e1d99b 100644 --- a/etpclient/websocket_manager.py +++ b/etpclient/websocket_manager.py @@ -3,12 +3,15 @@ # SPDX-License-Identifier: Apache-2.0 # import os +from typing import List, Dict + from fastavro import reader, schemaless_reader, schemaless_writer, writer from etptypes import avro_schema import json import sys import websocket import asyncio +import logging try: import thread @@ -18,8 +21,6 @@ import time from datetime import datetime -from base64 import b64encode - from etpproto.connection import ETPConnection, ConnectionType from etpproto.client_info import ClientInfo from etpproto.messages import Message @@ -27,18 +28,7 @@ import etpclient.etp.serverprotocols from etpclient.etp.requester import request_session - -import pprint - -pretty_p = pprint.PrettyPrinter(width=80) # , compact=True) - - -def basic_auth_header(username, password): - assert ":" not in username - user_pass = f"{username}:{password}" - basic_credentials = b64encode(user_pass.encode()).decode() - print("Credentials : 'Basic " + basic_credentials + "'") - return "authorization: Basic " + basic_credentials +from etpclient.utils import basic_auth_encode, basic_auth_header async def wait_for_response( @@ -48,8 +38,8 @@ async def wait_for_response( begining = datetime.now() while (datetime.now() - begining).seconds < timeout: # if (websocket_manager.recieved_msg_dict): - # print("##----##") - # pretty_p.pprint(websocket_manager.recieved_msg_dict) + # logging.debug("##----##") + # logging.debug(websocket_manager.recieved_msg_dict) if msg_id in websocket_manager.recieved_msg_dict and ( isinstance(websocket_manager.recieved_msg_dict[msg_id], Message) @@ -62,7 +52,9 @@ async def wait_for_response( ): return websocket_manager.recieved_msg_dict[msg_id] await asyncio.sleep(delta_t) - print("@Ws : ", websocket_manager.recieved_msg_dict) + # logging.debug("@Ws : ", websocket_manager.recieved_msg_dict) + # logging.debug("@Ws : ") + # logging.debug(websocket_manager.recieved_msg_dict) return None @@ -73,40 +65,69 @@ def __init__( username: str = None, password: str = None, token: str = None, + additional_headers: Dict = None ): self.closed = False self.recieved_msg_dict = {} - print(f"Connecting to {uri}") - if token: - print("auth bearer : \n" + "authorization: Bearer " + token) - self.ws = websocket.WebSocketApp( - uri, - subprotocols=[ETPConnection.SUB_PROTOCOL], - header=["authorization: Bearer " + token], - on_open=self.on_open, - on_message=self.on_message, - on_error=self.on_error, - on_close=self.on_close, - ) - elif username and password: - self.ws = websocket.WebSocketApp( - uri, - subprotocols=[ETPConnection.SUB_PROTOCOL], - header=[basic_auth_header(username, password)], - on_open=self.on_open, - on_message=self.on_message, - on_error=self.on_error, - on_close=self.on_close, - ) - else: - self.ws = websocket.WebSocketApp( - uri, - subprotocols=[ETPConnection.SUB_PROTOCOL], - on_open=self.on_open, - on_message=self.on_message, - on_error=self.on_error, - on_close=self.on_close, - ) + self.connected = False + logging.debug(f"Connecting to {uri}") + + headers = {} + if token is not None: + headers["Authorization"] = "Bearer " + token + elif username is not None: + headers["Authorization"] = "Basic " + basic_auth_encode(username, password) + + # headers["data-partition-id"] = "osdu" + # logging.debug(f"additional_headers {additional_headers}") + if isinstance(additional_headers, dict): + headers = headers | additional_headers + elif isinstance(additional_headers, list): + for a_h in additional_headers or []: + headers = headers | a_h + +# logging.debug(f"Headers {headers}") + + self.ws = websocket.WebSocketApp( + uri, + subprotocols=[ETPConnection.SUB_PROTOCOL], + header=headers, + on_open=self.on_open, + on_message=self.on_message, + on_error=self.on_error, + on_close=self.on_close, + ) + + # if token: + # logging.debug("auth bearer : \n" + "authorization: Bearer " + token) + # self.ws = websocket.WebSocketApp( + # uri, + # subprotocols=[ETPConnection.SUB_PROTOCOL], + # header=["authorization: Bearer " + token], + # on_open=self.on_open, + # on_message=self.on_message, + # on_error=self.on_error, + # on_close=self.on_close, + # ) + # elif username and password: + # self.ws = websocket.WebSocketApp( + # uri, + # subprotocols=[ETPConnection.SUB_PROTOCOL], + # header=[basic_auth_header(username, password)], + # on_open=self.on_open, + # on_message=self.on_message, + # on_error=self.on_error, + # on_close=self.on_close, + # ) + # else: + # self.ws = websocket.WebSocketApp( + # uri, + # subprotocols=[ETPConnection.SUB_PROTOCOL], + # on_open=self.on_open, + # on_message=self.on_message, + # on_error=self.on_error, + # on_close=self.on_close, + # ) self.etp_connection = ETPConnection( connection_type=ConnectionType.CLIENT, @@ -122,46 +143,47 @@ def __init__( def run(websocket): websocket.ws.run_forever() - print("thread terminating...") + logging.debug("thread terminating...") websocket.etp_connection.is_connected = False thread.start_new_thread(run, (self,)) def is_connected(self): - # print(self.etp_connection) - return self.etp_connection.is_connected + # logging.debug(self.etp_connection) + # return self.etp_connection.is_connected + return self.etp_connection.is_connected and not self.closed def on_message(self, ws, message): - # print("ON_MSG : ") - # print("ON_MSG : ", message) + # logging.debug("ON_MSG : ") + logging.debug(f"ON_MSG : {message}") async def handle_msg( conn: ETPConnection, websocket_manager, msg: bytes ): try: - # print("##> before recieved " ) + # logging.debug("##> before recieved " ) recieved = Message.decode_binary_message( msg, dict_map_pro_to_class=ETPConnection.generic_transition_table, ) if recieved.is_final_msg(): - print("\n##> recieved header : ", recieved.header) - # print("\n##> recieved body : ", recieved.body, "\n\n") + logging.debug(f"\n##> recieved header : {recieved.header}") + # logging.debug("\n##> recieved body : ", recieved.body, "\n\n") # if ( # recieved.header.protocol == 0 # or type(recieved.body) != bytes # ): - # print("ERR : ", recieved.body) - print("##> body type : ", type(recieved.body)) - # print("##> body content : ", recieved.body) + # logging.debug("ERR : ", recieved.body) + logging.debug(f"##> body type : {type(recieved.body)}") + # logging.debug("##> body content : ", recieved.body) # msg = await conn.decode_partial_message(recieved) - # print("##> msg " ) + # logging.debug("##> msg " ) if msg: async for b_msg in conn.handle_bytes_generator(msg): pass - # print(b_msg) + # logging.debug(b_msg) # if ( # b_msg.headers.correlation_id # not in websocket_manager.recieved_msg_dict[ @@ -185,43 +207,46 @@ async def handle_msg( recieved.header.correlation_id ].append(recieved) except Exception as e: - print(f"#ERR: {type(e).__name__}") - print(f"#Err: {msg}") + logging.error(f"#ERR: {type(e).__name__}") + logging.error(f"#Err: {msg}") raise e asyncio.run(handle_msg(self.etp_connection, self, message)) def on_error(self, ws, error): - print("ON_ERR") + logging.debug("ON_ERR") try: - print(error) + logging.debug(error) except Exception as e: - print(e) + logging.debug(e) def on_close(self, ws, a, b): - # print("ON_CLOSE") + # logging.debug("ON_CLOSE") + self.closed = True try: - self.closed = True - print("### closed ###", a, "\n", b) + logging.info(f"### closed ###\n{a}\n{b}") sys.stdout.flush() self.etp_connection.is_connected = False sys.exit(1) except Exception as e: - print(e) + logging.error(e) def on_open(self, ws): - # print("OPENING") + # logging.debug("OPENING") + self.connected = True try: answer = asyncio.run(self.send_and_wait(request_session(), 4.0)) - print("CONNECTED : ", answer) - + logging.info(f"CONNECTED : {answer}") except Exception as e: - print(e) + logging.error(e) + + async def send_raw(self, msg: bytes): + self.ws.send(msg) async def send_and_wait(self, req, timeout: int = 5): - # print("SENDING " + str(req)) - # print("SENDING NW") - # await self.print_message(req) + # logging.debug("SENDING " + str(req)) + # logging.debug("SENDING NW") + # await self.logging.debug_message(req) obj_msg = Message.get_object_message(etp_object=req) msg_id = -1 @@ -231,8 +256,10 @@ async def send_and_wait(self, req, timeout: int = 5): ) in self.etp_connection.send_msg_and_error_generator(obj_msg, None): self.ws.send(msg_to_send, websocket.ABNF.OPCODE_BINARY) msg_id = m_id - print(f"@WS: [{m_id}] {obj_msg}") - # print("Msg sent... ", msg_to_send) + # logging.debug(f"@WS: [{m_id}] {obj_msg}") + logging.debug(f"@WS: [{m_id}]") + logging.debug(obj_msg) + # logging.debug("Msg sent... ", msg_to_send) # return wait_for_response(conn=self.etp_connection, msg_id = msg_id, timeout=timeout) result = await wait_for_response( conn=self.etp_connection, @@ -240,14 +267,14 @@ async def send_and_wait(self, req, timeout: int = 5): msg_id=msg_id, timeout=timeout, ) - # print("Answer : \n", result) - # print("Answer recieved") + # logging.debug("Answer : \n", result) + # logging.debug("Answer recieved") return result async def send_no_wait(self, req, timeout: int = 5): - # print("SENDING NW" + str(req)) - # print("SENDING NW") - # await self.print_message(req) + # logging.debug("SENDING NW" + str(req)) + # logging.debug("SENDING NW") + # await self.logging.debug_message(req) msg_id_list = [] msg_id = -1 @@ -271,13 +298,13 @@ async def print_message(self, req): json.loads(avro_schema(type(req))), req.dict(by_alias=True), ) - print("====== header ======") + logging.debug("====== header ======") # Reading with open("test_unserialAvro_header.avro", "rb") as fo: r_dict = schemaless_reader( fo, json.loads(avro_schema(type(req))) ) for record in r_dict: - print(f"{record}: {r_dict[record]}") + logging.debug(f"{record}: {r_dict[record]}") finally: os.remove("test_unserialAvro_header.avro") diff --git a/poetry.lock b/poetry.lock index 15a56a5..3fd82ba 100644 --- a/poetry.lock +++ b/poetry.lock @@ -2,13 +2,13 @@ [[package]] name = "anytree" -version = "2.12.0" +version = "2.12.1" description = "Powerful and Lightweight Python Tree Data Structure with various plugins" optional = false python-versions = ">=3.7.2,<4" files = [ - {file = "anytree-2.12.0-py3-none-any.whl", hash = "sha256:b610433b95715625ea35e9009aa3e64261474c824fe9943dcbd618ed17cdeb58"}, - {file = "anytree-2.12.0.tar.gz", hash = "sha256:0dde0365cc8b1f3531e927694f39b903c360eadab2be09c50f3426ecca967949"}, + {file = "anytree-2.12.1-py3-none-any.whl", hash = "sha256:5ea9e61caf96db1e5b3d0a914378d2cd83c269dfce1fb8242ce96589fa3382f0"}, + {file = "anytree-2.12.1.tar.gz", hash = "sha256:244def434ccf31b668ed282954e5d315b4e066c4940b94aff4a7962d85947830"}, ] [package.dependencies] @@ -16,13 +16,13 @@ six = "*" [[package]] name = "appnope" -version = "0.1.3" +version = "0.1.4" description = "Disable App Nap on macOS >= 10.9" optional = false -python-versions = "*" +python-versions = ">=3.6" files = [ - {file = "appnope-0.1.3-py2.py3-none-any.whl", hash = "sha256:265a455292d0bd8a72453494fa24df5a11eb18373a60c7c0430889f22548605e"}, - {file = "appnope-0.1.3.tar.gz", hash = "sha256:02bd91c4de869fbb1e1c50aafc4098827a7a54ab2f39d9dcba6c9547ed920e24"}, + {file = "appnope-0.1.4-py2.py3-none-any.whl", hash = "sha256:502575ee11cd7a28c0205f379b525beefebab9d161b7c964670864014ed7213c"}, + {file = "appnope-0.1.4.tar.gz", hash = "sha256:1de3860566df9caf38f01f86f65e0e13e379af54f9e4bee1e66b48f2efffd1ee"}, ] [[package]] @@ -98,24 +98,25 @@ wheel = ">=0.37.1,<0.38.0" [[package]] name = "bandit" -version = "1.7.5" +version = "1.7.9" description = "Security oriented static analyser for 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"etpclient.scripter:download_xmls" +test_psa = "etpclient.scripter:test_put_sub_array" +init_gabbro = "etpclient.scripter:init_gabbro" [tool.poetry-dynamic-versioning] enable = true From 7527b7dece6082d977a4aae46ab5af2928643981 Mon Sep 17 00:00:00 2001 From: Valentin Gauthier Date: Tue, 10 Dec 2024 16:45:39 +0100 Subject: [PATCH 2/2] bugfix + scripts improvements --- etpclient/etp/h5_handler.py | 48 +- etpclient/etp/requester.py | 181 +++---- etpclient/etp/runner.py | 11 +- etpclient/etp/serverprotocols.py | 26 +- etpclient/main.py | 15 +- etpclient/rest_client.py | 53 +- etpclient/scripter.py | 146 +++++- etpclient/server_config.py | 1 + etpclient/websocket_manager.py | 8 +- poetry.lock | 861 ++++++++++++++++--------------- pyproject.toml | 9 +- 11 files changed, 779 insertions(+), 580 deletions(-) diff --git a/etpclient/etp/h5_handler.py b/etpclient/etp/h5_handler.py index 25ae828..d8a104c 100644 --- a/etpclient/etp/h5_handler.py +++ b/etpclient/etp/h5_handler.py @@ -2,22 +2,20 @@ # Copyright (c) 2022-2023 Geosiris. # SPDX-License-Identifier: Apache-2.0 # +import logging from typing import Dict import h5py -import numpy as np +from etptypes.energistics.etp.v12.protocol.data_array.put_data_arrays import ( + PutDataArrays, +) from etpclient.utils import ( search_all_element_value, - get_xml_dict_from_path, get_xml_dict_from_string, xml_dict_get_uri, ) -from etptypes.energistics.etp.v12.protocol.data_array.put_data_arrays import ( - PutDataArrays, -) - def descend_obj(obj, sep="\t"): """ @@ -63,25 +61,29 @@ def generate_put_data_arrays( for path_in_hdf in search_all_element_value( obj_dict, "PathInExternalFile" ) + search_all_element_value(obj_dict, "PathInHdfFile"): - print(f"search in h5 {path_in_hdf}") - data, shape, dtype = h5_search_dataset(h5_file_path, path_in_hdf) - print(f"\t==> shape {shape}") - pda_dict = { - "dataArrays": { - "0": { - "uid": { - "uri": xml_dict_get_uri(obj_dict, dataspace), - "pathInResource": path_in_hdf, - }, - "array": { - "dimensions": list(shape), - "data": {"item": {"values": data.flatten().tolist()}}, - }, - "customData": {}, + logging.info(f"search in h5 {path_in_hdf}") + try: + data, shape, dtype = h5_search_dataset(h5_file_path, path_in_hdf) + logging.info(f"\t==> shape {shape}") + pda_dict = { + "dataArrays": { + "0": { + "uid": { + "uri": xml_dict_get_uri(obj_dict, dataspace), + "pathInResource": path_in_hdf, + }, + "array": { + "dimensions": list(shape), + "data": {"item": {"values": data.flatten().tolist()}}, + }, + "customData": {}, + } } } - } - res.append(PutDataArrays.parse_obj(pda_dict)) + res.append(PutDataArrays.parse_obj(pda_dict)) + except Exception as e: + logging.error("Failed to find data") + logging.error(e) # res.append(h5_search_dataset(h5_file_path, path_in_hdf)) return res diff --git a/etpclient/etp/requester.py b/etpclient/etp/requester.py index e7cf6d9..0f0493f 100644 --- a/etpclient/etp/requester.py +++ b/etpclient/etp/requester.py @@ -2,80 +2,85 @@ # Copyright (c) 2022-2023 Geosiris. # SPDX-License-Identifier: Apache-2.0 # -import os -import re +import uuid import zipfile +from datetime import datetime +from typing import List from zipfile import ZipFile import h5py import numpy as np +from etpproto.connection import ETPConnection, CommunicationProtocol +from etpproto.uri import * +from etpproto.uri import parse_uri from etptypes.energistics.etp.v12.datatypes.any_array import AnyArray -from etptypes.energistics.etp.v12.datatypes.data_array_types.put_data_subarrays_type import PutDataSubarraysType -from etptypes.energistics.etp.v12.protocol.data_array.get_data_arrays_response import GetDataArraysResponse -from etptypes.energistics.etp.v12.protocol.data_array.put_data_subarrays import PutDataSubarrays -from lxml import etree -from io import BytesIO - -from lxml.etree import ( - Element, - ElementTree, - fromstring, - XPath, +from etptypes.energistics.etp.v12.datatypes.data_array_types.data_array_identifier import ( + DataArrayIdentifier, ) - -from typing import List - -from etptypes.energistics.etp.v12.datatypes.supported_protocol import ( - SupportedProtocol, +from etptypes.energistics.etp.v12.datatypes.data_array_types.get_data_subarrays_type import ( + GetDataSubarraysType, ) -from etptypes.energistics.etp.v12.datatypes.supported_data_object import ( - SupportedDataObject, +from etptypes.energistics.etp.v12.datatypes.data_array_types.put_data_subarrays_type import PutDataSubarraysType +from etptypes.energistics.etp.v12.datatypes.data_value import DataValue +from etptypes.energistics.etp.v12.datatypes.object.active_status_kind import ( + ActiveStatusKind, ) -from etptypes.energistics.etp.v12.datatypes.version import Version - -import uuid -from datetime import datetime - -from etpproto.messages import Message - from etptypes.energistics.etp.v12.datatypes.object.context_info import ( ContextInfo, ) from etptypes.energistics.etp.v12.datatypes.object.context_scope_kind import ( ContextScopeKind, ) -from etptypes.energistics.etp.v12.datatypes.object.active_status_kind import ( - ActiveStatusKind, +from etptypes.energistics.etp.v12.datatypes.object.data_object import ( + DataObject, ) +from etptypes.energistics.etp.v12.datatypes.object.dataspace import Dataspace from etptypes.energistics.etp.v12.datatypes.object.relationship_kind import ( RelationshipKind, ) - - -from etptypes.energistics.etp.v12.protocol.dataspace.get_dataspaces import ( - GetDataspaces, +from etptypes.energistics.etp.v12.datatypes.object.resource import Resource +from etptypes.energistics.etp.v12.datatypes.supported_data_object import ( + SupportedDataObject, ) -from etptypes.energistics.etp.v12.protocol.dataspace.delete_dataspaces import ( - DeleteDataspaces, +from etptypes.energistics.etp.v12.datatypes.supported_protocol import ( + SupportedProtocol, ) -from etptypes.energistics.etp.v12.protocol.dataspace.put_dataspaces import ( - PutDataspaces, +from etptypes.energistics.etp.v12.datatypes.version import Version +from etptypes.energistics.etp.v12.protocol.core.authorize import Authorize +from etptypes.energistics.etp.v12.protocol.core.close_session import ( + CloseSession, ) - from etptypes.energistics.etp.v12.protocol.core.request_session import ( RequestSession, ) -from etptypes.energistics.etp.v12.protocol.core.close_session import ( - CloseSession, +from etptypes.energistics.etp.v12.protocol.data_array.get_data_array_metadata import ( + GetDataArrayMetadata, ) -from etptypes.energistics.etp.v12.protocol.discovery.get_resources import ( - GetResources, +from etptypes.energistics.etp.v12.protocol.data_array.get_data_arrays import ( + GetDataArrays, +) +from etptypes.energistics.etp.v12.protocol.data_array.get_data_arrays_response import GetDataArraysResponse +from etptypes.energistics.etp.v12.protocol.data_array.get_data_subarrays import ( + GetDataSubarrays, +) +from etptypes.energistics.etp.v12.protocol.data_array.put_data_subarrays import PutDataSubarrays +from etptypes.energistics.etp.v12.protocol.dataspace.delete_dataspaces import ( + DeleteDataspaces, +) +from etptypes.energistics.etp.v12.protocol.dataspace.get_dataspaces import ( + GetDataspaces, +) +from etptypes.energistics.etp.v12.protocol.dataspace.put_dataspaces import ( + PutDataspaces, ) from etptypes.energistics.etp.v12.protocol.discovery.get_deleted_resources import ( GetDeletedResources, ) -from etptypes.energistics.etp.v12.protocol.store.put_data_objects import ( - PutDataObjects, +from etptypes.energistics.etp.v12.protocol.discovery.get_resources import ( + GetResources, +) +from etptypes.energistics.etp.v12.protocol.store.delete_data_objects import ( + DeleteDataObjects, ) from etptypes.energistics.etp.v12.protocol.store.get_data_objects import ( GetDataObjects, @@ -83,59 +88,27 @@ from etptypes.energistics.etp.v12.protocol.store.get_data_objects_response import ( GetDataObjectsResponse, ) -from etptypes.energistics.etp.v12.protocol.store.delete_data_objects import ( - DeleteDataObjects, -) -from etptypes.energistics.etp.v12.datatypes.object.data_object import ( - DataObject, -) -from etptypes.energistics.etp.v12.protocol.core.authorize_response import ( - AuthorizeResponse, -) -from etptypes.energistics.etp.v12.protocol.core.authorize import Authorize -from etptypes.energistics.etp.v12.datatypes.data_array_types.data_array_identifier import ( - DataArrayIdentifier, -) -from etptypes.energistics.etp.v12.datatypes.data_array_types.get_data_subarrays_type import ( - GetDataSubarraysType, -) -from etptypes.energistics.etp.v12.protocol.data_array.get_data_arrays import ( - GetDataArrays, -) -from etptypes.energistics.etp.v12.protocol.data_array.get_data_subarrays import ( - GetDataSubarrays, -) - -from etptypes.energistics.etp.v12.protocol.data_array.get_data_array_metadata import ( - GetDataArrayMetadata, +from etptypes.energistics.etp.v12.protocol.store.put_data_objects import ( + PutDataObjects, ) - - from etptypes.energistics.etp.v12.protocol.supported_types.get_supported_types import ( GetSupportedTypes, ) -from etptypes.energistics.etp.v12.protocol.supported_types.get_supported_types_response import ( - GetSupportedTypesResponse, +from lxml import etree +from lxml.etree import ( + Element, + ElementTree, + fromstring, + XPath, ) -from etptypes.energistics.etp.v12.datatypes.data_value import DataValue -from etptypes.energistics.etp.v12.datatypes.object.resource import Resource -from etptypes.energistics.etp.v12.datatypes.object.dataspace import Dataspace - -# from etptypes.energistics.etp.v12.datatypes.uuid import to_Uuid, to_UUID - -from etpproto.uri import * - -from etpproto.connection import ETPConnection, CommunicationProtocol -from etpproto.uri import parse_uri - from etpclient.etp.h5_handler import generate_put_data_arrays -from etpclient.utils import basic_auth_encode, basic_auth_header, get_xml_dict_from_string, search_all_element_value +from etpclient.rest_client import rest_client_from_config +from etpclient.server_config import * +from etpclient.utils import basic_auth_encode, get_xml_dict_from_string, search_all_element_value, xml_get_type, \ + get_xml_tree_string -from etpclient.utils import ( - xml_get_type, - get_xml_tree_string, -) +# from etptypes.energistics.etp.v12.datatypes.uuid import to_Uuid, to_UUID ENERGYML_NAMESPACES = { @@ -421,18 +394,18 @@ def put_data_object_by_path( uuid = findUuid(zinfo.filename) if uuid is None: uuid = find_uuid_in_xml(file_content) - print(f"UUID {uuid}") if uuid is not None and ( uuids_filter is None or len(uuids_filter) == 0 or uuid in uuids_filter ): + print(f"Uploading {uuid}") do_lst[len(do_lst)] = _create_data_object( file_content.decode("utf-8"), dataspace_name, ) - else: - print(f"Ignoring file : {zinfo.filename}") + # else: + # print(f"Ignoring file : {zinfo.filename}") except FileNotFoundError: print(f"File {path} not found") result.append(PutDataObjects(data_objects=do_lst)) @@ -627,9 +600,11 @@ async def put_data_array_sender( dataspace_name: str, type_filter: str = None, ): - print( + logging.debug( f"uuids_filter : {uuids_filter} epc_or_xml_file_path : {epc_or_xml_file_path} h5_file_path : {h5_file_path} dataspace_name : {dataspace_name} type_filter : {type_filter} " ) + config = ServerConfig() + rest_client = rest_client_from_config(config) if epc_or_xml_file_path.endswith(".epc"): zfile = zipfile.ZipFile(epc_or_xml_file_path, "r") for zinfo in zfile.infolist(): @@ -654,7 +629,7 @@ async def put_data_array_sender( ) if accept_file: - print(" > accept_file Uuid : ", uuid) + logging.debug(f" > accept_file Uuid : {uuid}") with zfile.open(zinfo.filename) as myfile: for pda in generate_put_data_arrays( myfile.read().decode("utf-8"), @@ -663,11 +638,15 @@ async def put_data_array_sender( ): # print(type(pda), pda) try: - yield await websocket.send_no_wait(pda) + if config[USE_REST]: + logging.info("USING rest") + rest_client.put_dataarray(pda.json(by_alias=True)) + else: + yield await websocket.send_no_wait(pda) except Exception as e: - print("ERROR : ", e) + logging.error(e) else: - print("Not imported ", uuid, " -- ", uuid in uuids_filter) + logging.error(f"Not imported {uuid} -- {uuid in uuids_filter}") pass zfile.close() else: @@ -676,9 +655,13 @@ async def put_data_array_sender( f.read().decode("utf-8"), h5_file_path, dataspace_name ): try: - yield await websocket.send_no_wait(pda) + if config[USE_REST]: + logging.info("USING rest") + rest_client.put_dataarray(pda.json(by_alias=True)) + else: + yield await websocket.send_no_wait(pda) except Exception as e: - print(e) + logging.error(e) async def download_dataspace( diff --git a/etpclient/etp/runner.py b/etpclient/etp/runner.py index 4e80fb3..5bc4196 100644 --- a/etpclient/etp/runner.py +++ b/etpclient/etp/runner.py @@ -123,7 +123,15 @@ def get_parser(): # ) # parser.add_argument("--token", "-t", type=str, help="An access token") parser.add_argument( - "--caps", action="store_true", help="print http capabilities" + "--caps", type=List, help="print http capabilities" + ) + return parser + + +def get_parser_downloader(): + parser = get_parser() + parser.add_argument( + "-f", "--filter", nargs="*", default=[], help="qualifiedType list to filter the objects to download" ) return parser @@ -231,6 +239,7 @@ async def client( print("Timeout...") result = None + print(f"run func {run_func} running {running} wsm {wsm.is_connected()} {wsm.closed}") while running: running = await run_func(wsm) diff --git a/etpclient/etp/serverprotocols.py b/etpclient/etp/serverprotocols.py index 61730d3..ee35c54 100644 --- a/etpclient/etp/serverprotocols.py +++ b/etpclient/etp/serverprotocols.py @@ -692,19 +692,19 @@ def computeCapability(supportedProtocolList_fun) -> ServerCapabilities: # SupportedDataObject( # qualified_type="resqml22.*", # data_object_capabilities={}), - # # data_object_capabilities={"SupportsGet": True, "SupportsPut": True, "SupportsDelete": True}) + # data_object_capabilities={"SupportsGet": True, "SupportsPut": True, "SupportsDelete": True}) # SupportedDataObject({'dataObjectCapabilities': {'SupportsDelete': {'item': {'boolean': True}}, # 'SupportsGet': {'item': {'boolean': True}}, - # 'SupportsPut': {'item': {'boolean': True}} + # 'SupportsPut': {'item': {'boolean': True}}}} # ) - # SupportedDataObject( - # qualified_type="eml20.*", - # data_object_capabilities={ - # "SupportsDelete": DataValue(item=True), - # "SupportsPut": DataValue(item=True), - # "SupportsGet": DataValue(item=True), - # }, - # ), + SupportedDataObject( + qualified_type="eml20.*", + data_object_capabilities={ + "SupportsDelete": DataValue(item=True), + "SupportsPut": DataValue(item=True), + "SupportsGet": DataValue(item=True), + }, + ), SupportedDataObject( qualified_type="resqml20.*", data_object_capabilities={ @@ -733,13 +733,13 @@ def computeCapability(supportedProtocolList_fun) -> ServerCapabilities: # supported_compression=["gzip"], supported_formats=["xml"], endpoint_capabilities={ - "MaxWebSocketMessagePayloadSize": DataValue(item=4000) + "MaxWebSocketMessagePayloadSize": DataValue(item=128000000) }, supported_encodings=["binary"], contact_information=Contact( organization_name="Geosiris", - contact_name="Gauthier Valentin, Untereiner Lionel", + contact_name="Gauthier Valentin", contact_phone="", - contact_email="valentin.gauthier@geosiris.com, lionel.untereiner@geosiris.com", + contact_email="valentin.gauthier@geosiris.com", ), ) diff --git a/etpclient/main.py b/etpclient/main.py index 38942b9..32e03ec 100644 --- a/etpclient/main.py +++ b/etpclient/main.py @@ -61,6 +61,8 @@ def helper(): async def launch_command(wsm: WebSocketManager, cmd: str) -> bool: + if len(cmd.strip()) <= 0: + return True args = list(filter(lambda x: len(x) > 0, cmd.split(" "))) command = args[0].lower() command_params = args[1:] if len(args) > 1 else [] @@ -169,12 +171,13 @@ async def launch_command(wsm: WebSocketManager, cmd: str) -> bool: ) print(f"\n\n{get_data_arr}\n\n") - result = await wsm.send_no_wait(get_data_arr) - if result: - pretty_p.pprint(result) - pass + config = ServerConfig() + rest_client = rest_client_from_config(config) + if config[USE_REST]: + logging.info("USING rest") + pretty_p.pprint(rest_client.get_dataarray_from_gda(get_data_arr.json(by_alias=True))) else: - print("No answer...") + await wsm.send_no_wait(get_data_arr) elif command.startswith("getdataobject"): get_data_obj = get_data_object(command_params) @@ -236,7 +239,7 @@ async def launch_command(wsm: WebSocketManager, cmd: str) -> bool: print(f"\n\nCommand is '{cmd}'") if len(command_params) < 2: print( - "Not enough paratmeter : need a DATASPACE, an EPC_FILE_PATH and a H5_FILE_PATH" + "Not enough parameter : need a DATASPACE, an EPC_FILE_PATH and a H5_FILE_PATH" ) else: type_filter = None diff --git a/etpclient/rest_client.py b/etpclient/rest_client.py index a0068ee..e4315c3 100644 --- a/etpclient/rest_client.py +++ b/etpclient/rest_client.py @@ -156,6 +156,28 @@ def get_dataarray(self, bearer_token=self.bearer_token, ) + def get_dataarray_from_gda(self, gda: dict): + url = f"{self.host}/data-array/get" + print(f"URL: {url}") + return EtpRestClient.make_request( + method=HttpMethod.POST, + url=url, + data=gda, + add_headers=self.headers, + bearer_token=self.bearer_token, + ) + + def put_dataarray(self, pda: dict): + url = f"{self.host}/data-array/put" + print(f"URL: {url}") + return EtpRestClient.make_request( + method=HttpMethod.POST, + url=url, + data=pda, + add_headers=self.headers, + bearer_token=self.bearer_token, + ) + def s_download_dataspace(self, dataspace_name: str, output_folder: str, h5_for_each: bool = False, download_h5: bool = True, download_xml: bool = True) -> None: self.s_download_objects(list(map(lambda x: x['uri'], self.get_resources(dataspace_name).json())), output_folder, h5_for_each, download_h5, download_xml) @@ -264,7 +286,7 @@ def _send_request_with_bearer_token( if not response.ok: response.raise_for_status() - return response + return response.json() @staticmethod def make_request( @@ -280,22 +302,39 @@ def make_request( add_headers = add_headers or {} params = params or {} + if isinstance(add_headers, list): + res = {} + for o in add_headers: + if isinstance(o, dict): + res = res | o + elif isinstance(o, tuple): + res[o[0]] = o[1] + + add_headers = res + headers = { 'content-type': 'application/json', } - + print(add_headers) for key, value in add_headers.items(): headers[key] = value - if no_auth: + if no_auth or bearer_token == None: response = EtpRestClient._send_request(method, url, data, headers, params) - elif bearer_token: + else: #bearer_token: response = EtpRestClient._send_request_with_bearer_token(method, url, data, headers, params, bearer_token) # elif cls.token_refresher: # response = self._send_request_with_token_refresher(headers, method, url, data, params) - else: - raise RequestError() - return response + # else: + # raise RequestError() + if not response.ok: + response.raise_for_status() + + return response.json() + + +def rest_client_from_config(config: ServerConfig) -> EtpRestClient: + return EtpRestClient(host= config[SERVER_URL], headers=config[SERVER_ADDITIONAL_HEADERS], bearer_token=config[SERVER_TOKEN] or get_token_from_config(config)) if __name__ == "__main__": diff --git a/etpclient/scripter.py b/etpclient/scripter.py index 9eb17a0..9172aaf 100644 --- a/etpclient/scripter.py +++ b/etpclient/scripter.py @@ -2,9 +2,11 @@ # Copyright (c) 2022-2023 Geosiris. # SPDX-License-Identifier: Apache-2.0 # +import traceback import asyncio import logging import pprint +import re import sys from io import StringIO from pathlib import Path @@ -22,7 +24,7 @@ from etptypes.energistics.etp.v12.protocol.dataspace.get_dataspaces_response import GetDataspacesResponse from etpclient.etp.requester import * -from etpclient.etp.runner import client, get_parser +from etpclient.etp.runner import client, get_parser, get_parser_downloader from etpclient.etp.serverprotocols import enable_logs from etpclient.main import launch_command from etpclient.rest_client import get_token_from_config @@ -66,41 +68,58 @@ async def script_clean_fake_ds(wsm: WebSocketManager): else: print("No answer...") - return False -async def download_objects(uris: List[str], wsm: WebSocketManager, output_folder: str=""): +async def download_objects(uris: List[str], wsm: WebSocketManager, output_folder: str = ""): try: os.makedirs(output_folder) except: pass for uri in uris: print(uri) - data_obj = await wsm.send_and_wait(get_data_object(uris=[uri])) - try: - # p_uri = parse_uri(uri) - f_path = Path(f"{output_folder}/{uri[7:]}.xml") - if isinstance(data_obj[0].body, GetDataObjectsResponse): - with f_path.open("wb") as _f: - dos = data_obj[0].body.data_objects - _f.write(dos[list(dos.keys())[0]].data) + f_path = Path(f"{output_folder}/{uri[7:]}.xml") + if not os.path.exists(f_path): # and "channel" not in uri.lower(): + data_obj = await wsm.send_and_wait(get_data_object(uris=[uri]), timeout=5) + if data_obj is not None: + try: + # p_uri = parse_uri(uri) + + if isinstance(data_obj[0].body, GetDataObjectsResponse): + with f_path.open("wb") as _f: + dos = data_obj[0].body.data_objects + _f.write(dos[list(dos.keys())[0]].data) + else: + print(f"\tNot readable : {data_obj[0].body}") + except Exception as e: + print(f"\t Exception {e}\n\t{data_obj}") + print(traceback.format_exc()) else: - print(f"\tNot readable : {data_obj[0].body}") - except Exception as e: - print(f"\t Exception {e}\n\t{data_obj}") + print(f"Failed to get Data object : {uri}") + + +def value_found_in_source(source: str, filterList: List[str]): + for f in filterList: + if f in source: + return True + return False -async def download_dataspace_objects(dataspace_uri: str, wsm: WebSocketManager, output_folder: str=""): +async def download_dataspace_objects(dataspace_uri: str, wsm: WebSocketManager, output_folder: str = "", filterQualifiedType: List[str]=[]): print(f"GetResources on {dataspace_uri}") + logging.debug(f"filterQualifiedType : {filterQualifiedType}") dataspaces_objs = await wsm.send_and_wait(get_resouces(uri=dataspace_uri), timeout=60) + uris = list(map(lambda r: r.uri, dataspaces_objs[0].body.resources)) + if(filterQualifiedType is not None and len(filterQualifiedType) > 0): + uris = list(filter(lambda u: value_found_in_source(u, filterQualifiedType), uris)) + logging.debug(f"filtered : {uris}") if dataspaces_objs is not None: - await download_objects(list(map(lambda r: r.uri, dataspaces_objs[0].body.resources)), wsm, output_folder) + await download_objects(uris, wsm, output_folder) else: print(f"No data for {dataspace_uri}") -async def script_download_server(wsm: WebSocketManager, output_folder: str="downloads", dataspaces: List[str]=[]): +async def script_download_server(wsm: WebSocketManager, output_folder: str = "downloads", dataspaces: List[str] = [], filter: List[str]=[]): enable_logs(False) dataspaces_res = await wsm.send_and_wait(get_dataspaces(), timeout=10) @@ -113,7 +132,7 @@ async def script_download_server(wsm: WebSocketManager, output_folder: str="down for d_uri in dataspaces: p_uri = parse_uri(d_uri) print(d_uri, p_uri.dataspace) - await download_dataspace_objects(d_uri, wsm, f"{output_folder}/{p_uri.dataspace}") + await download_dataspace_objects(d_uri, wsm, f"{output_folder}/{p_uri.dataspace}", filterQualifiedType=filter) # for m in dataspaces_res: # if isinstance(m.body, GetDataspacesResponse): # for d in m.body.dataspaces: @@ -129,7 +148,6 @@ async def script_push_testing_package( epc_path="D:/Geosiris/Cloud/Resqml_Tools/2023-DATA/06_FESAPI_RESQML_WITSML_PRODML/testingPackageCpp.epc", h5_path="D:/Geosiris/Cloud/Resqml_Tools/2023-DATA/06_FESAPI_RESQML_WITSML_PRODML/testingPackageCpp.h5", ): - print(f"PutDataSpace {dataspace_name}") result = await wsm.send_and_wait( put_dataspace([dataspace_name]) @@ -178,7 +196,6 @@ async def script_put_sub_array(wsm: WebSocketManager): full_data = [float(i) for i in range(27)] dims = [3, 3, 3] - # TODO: run a putSubArrayRequest # PutUninitializedDataArrays # PutDataSubarrays @@ -332,13 +349,95 @@ def download_xmls(): config = ServerConfig() logging.basicConfig(filename="etpclient.log", level=logging.DEBUG) - args = get_parser().parse_args() + args = get_parser_downloader().parse_args() + + host_name = urlparse(config.get(SERVER_URL)).hostname + print(args.filter) + + asyncio.run( + client( + run_func=lambda wsm: script_download_server(wsm, output_folder=f"downloads/{host_name}", filter=args.filter), + config=config, + server_capabilities=args.caps, + ) + ) + + +async def script_upload( + wsm: WebSocketManager, + dataspace_name: str = None, + uuid_filter: List = None, + epc_path: str = None, + h5_paths: List = None, +): + if uuid_filter is None: + uuid_filter = [] + if h5_paths is None: + h5_paths = [] + + for putDataObj in put_data_object_by_path( + path=epc_path, + dataspace_name=dataspace_name, + uuids_filter=uuid_filter, + ): + result = await wsm.send_no_wait(putDataObj) + if result: + pretty_p.pprint(result) + pass + else: + print("No answer...") + + for h5_path in h5_paths: + async for msg_idx in put_data_array_sender( + websocket=wsm, + uuids_filter=uuid_filter, + epc_or_xml_file_path=epc_path, + h5_file_path=h5_path, + dataspace_name=dataspace_name, + type_filter=None, + ): + print(msg_idx) + + return False + + +def upload(): + load_dotenv(override=True) + config = ServerConfig() + logging.basicConfig(filename="etpclient.log", level=logging.DEBUG) + + args, unknown_args = get_parser().parse_known_args() host_name = urlparse(config.get(SERVER_URL)).hostname + print(unknown_args) + if len(unknown_args) < 2: + print("Usage : poetry run upload [DATASPACE_NAME] [EPC_FILE_PATH] [H5_FILE_PATH]* [UUID_FILTER]*\n" + "If no uuid provided, all elements will be pushed") + return + + dataspace = unknown_args[0] + epc_path = None + h5_paths = [] + uuid_filter = [] + + for ua in unknown_args: + if ua.lower().endswith(".epc") and epc_path is None: + epc_path = ua + elif ua.lower().endswith(".h5"): + h5_paths.append(ua) + elif re.match(UUID_REGEX, ua): + uuid_filter.append(ua) + asyncio.run( client( - run_func=lambda wsm: script_download_server(wsm, output_folder=f"downloads/{host_name}"), + run_func=lambda wsm: script_upload( + wsm, + dataspace_name=dataspace, + uuid_filter=uuid_filter, + epc_path=epc_path, + h5_paths=h5_paths + ), config=config, server_capabilities=args.caps, ) @@ -377,7 +476,7 @@ async def _file_script_line_reader(wsm: WebSocketManager, fio: TextIO): return True -def file_script(f_path: Optional[str]=None): +def file_script(f_path: Optional[str] = None): if f_path is None: f_path = sys.argv[1] @@ -390,6 +489,7 @@ def file_script(f_path: Optional[str]=None): with open(f_path, "r") as f: async def _consumer(wsm): return await _file_script_line_reader(wsm=wsm, fio=f) + asyncio.run( client( run_func=_consumer, diff --git a/etpclient/server_config.py b/etpclient/server_config.py index 7243d6c..474042d 100644 --- a/etpclient/server_config.py +++ b/etpclient/server_config.py @@ -21,6 +21,7 @@ SERVER_TOKEN_GRANT_TYPE = "token-grant-type" SERVER_TOKEN_SCOPE = "token-scope" SERVER_TOKEN_REFRESH_TOKEN = "token-refresh_token" +USE_REST = "use-rest" def replace_env_templates(value: Any): diff --git a/etpclient/websocket_manager.py b/etpclient/websocket_manager.py index 6e1d99b..67e028d 100644 --- a/etpclient/websocket_manager.py +++ b/etpclient/websocket_manager.py @@ -78,15 +78,13 @@ def __init__( elif username is not None: headers["Authorization"] = "Basic " + basic_auth_encode(username, password) - # headers["data-partition-id"] = "osdu" - # logging.debug(f"additional_headers {additional_headers}") if isinstance(additional_headers, dict): headers = headers | additional_headers elif isinstance(additional_headers, list): for a_h in additional_headers or []: headers = headers | a_h -# logging.debug(f"Headers {headers}") + logging.debug(f"Headers {headers}") self.ws = websocket.WebSocketApp( uri, @@ -235,7 +233,9 @@ def on_open(self, ws): # logging.debug("OPENING") self.connected = True try: - answer = asyncio.run(self.send_and_wait(request_session(), 4.0)) + req_sess = request_session() + answer = asyncio.run(self.send_and_wait(req_sess, 4.0)) + logging.debug(json.dumps(json.loads(req_sess.json()), indent=4)) logging.info(f"CONNECTED : {answer}") except Exception as e: logging.error(e) diff --git a/poetry.lock b/poetry.lock index 3fd82ba..083eef8 100644 --- a/poetry.lock +++ b/poetry.lock @@ -1,4 +1,4 @@ -# This file is automatically @generated by Poetry 1.7.1 and should not be changed by hand. +# This file is automatically @generated by Poetry 1.8.3 and should not be changed by hand. 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