Skip to content

Commit 92e74f7

Browse files
gerritjandebruingerritjandebruin
committed
Latest updates to figures and documentation.
1 parent 391621b commit 92e74f7

36 files changed

+4618
-4680
lines changed

‎notebooks/01-preprocessing-stats.ipynb renamed to ‎01-preprocessing-stats.ipynb

Lines changed: 92 additions & 95 deletions
Original file line numberDiff line numberDiff line change
@@ -6,11 +6,11 @@
66
"id": "13c6e761-fab0-4f6b-a5fe-cfda3d03957d",
77
"metadata": {
88
"execution": {
9-
"iopub.execute_input": "2021-11-10T10:36:03.523368Z",
10-
"iopub.status.busy": "2021-11-10T10:36:03.523131Z",
11-
"iopub.status.idle": "2021-11-10T10:36:04.597429Z",
12-
"shell.execute_reply": "2021-11-10T10:36:04.596545Z",
13-
"shell.execute_reply.started": "2021-11-10T10:36:03.523301Z"
9+
"iopub.execute_input": "2021-11-25T10:06:11.882021Z",
10+
"iopub.status.busy": "2021-11-25T10:06:11.881778Z",
11+
"iopub.status.idle": "2021-11-25T10:06:13.078183Z",
12+
"shell.execute_reply": "2021-11-25T10:06:13.077527Z",
13+
"shell.execute_reply.started": "2021-11-25T10:06:11.881956Z"
1414
},
1515
"tags": []
1616
},
@@ -46,9 +46,6 @@
4646
"import typer\n",
4747
"from tqdm.auto import tqdm\n",
4848
"\n",
49-
"root = os.path.dirname(os.getcwd())\n",
50-
"os.chdir(root)\n",
51-
"\n",
5249
"import src"
5350
]
5451
},
@@ -66,11 +63,11 @@
6663
"id": "3afdc87d-0cbd-42d9-a770-18a3e214c6af",
6764
"metadata": {
6865
"execution": {
69-
"iopub.execute_input": "2021-11-10T10:36:04.598648Z",
70-
"iopub.status.busy": "2021-11-10T10:36:04.598502Z",
71-
"iopub.status.idle": "2021-11-10T10:37:52.779780Z",
72-
"shell.execute_reply": "2021-11-10T10:37:52.778611Z",
73-
"shell.execute_reply.started": "2021-11-10T10:36:04.598628Z"
66+
"iopub.execute_input": "2021-11-25T10:06:13.079332Z",
67+
"iopub.status.busy": "2021-11-25T10:06:13.079141Z",
68+
"iopub.status.idle": "2021-11-25T10:08:26.357065Z",
69+
"shell.execute_reply": "2021-11-25T10:08:26.355940Z",
70+
"shell.execute_reply.started": "2021-11-25T10:06:13.079313Z"
7471
},
7572
"tags": []
7673
},
@@ -140,11 +137,11 @@
140137
"id": "71ee0b6a-0286-4840-a17d-cdd76161c1cc",
141138
"metadata": {
142139
"execution": {
143-
"iopub.execute_input": "2021-11-10T10:37:52.817961Z",
144-
"iopub.status.busy": "2021-11-10T10:37:52.817544Z",
145-
"iopub.status.idle": "2021-11-10T10:37:52.850128Z",
146-
"shell.execute_reply": "2021-11-10T10:37:52.849337Z",
147-
"shell.execute_reply.started": "2021-11-10T10:37:52.817924Z"
140+
"iopub.execute_input": "2021-11-25T10:08:26.360619Z",
141+
"iopub.status.busy": "2021-11-25T10:08:26.360172Z",
142+
"iopub.status.idle": "2021-11-25T10:08:26.399937Z",
143+
"shell.execute_reply": "2021-11-25T10:08:26.399409Z",
144+
"shell.execute_reply.started": "2021-11-25T10:08:26.360588Z"
148145
}
149146
},
150147
"outputs": [
@@ -171,11 +168,11 @@
171168
"id": "efca8023-498f-473f-b01c-16f0fada6dfd",
172169
"metadata": {
173170
"execution": {
174-
"iopub.execute_input": "2021-11-10T10:37:52.851397Z",
175-
"iopub.status.busy": "2021-11-10T10:37:52.851260Z",
176-
"iopub.status.idle": "2021-11-10T10:37:53.655302Z",
177-
"shell.execute_reply": "2021-11-10T10:37:53.654507Z",
178-
"shell.execute_reply.started": "2021-11-10T10:37:52.851379Z"
171+
"iopub.execute_input": "2021-11-25T10:08:26.401098Z",
172+
"iopub.status.busy": "2021-11-25T10:08:26.400775Z",
173+
"iopub.status.idle": "2021-11-25T10:08:27.357737Z",
174+
"shell.execute_reply": "2021-11-25T10:08:27.357094Z",
175+
"shell.execute_reply.started": "2021-11-25T10:08:26.401077Z"
179176
},
180177
"tags": []
181178
},
@@ -211,11 +208,11 @@
211208
"id": "fdce0905-e088-4182-affc-906f06b5aba5",
212209
"metadata": {
213210
"execution": {
214-
"iopub.execute_input": "2021-11-10T10:37:53.656483Z",
215-
"iopub.status.busy": "2021-11-10T10:37:53.656350Z",
216-
"iopub.status.idle": "2021-11-10T10:37:53.760861Z",
217-
"shell.execute_reply": "2021-11-10T10:37:53.760055Z",
218-
"shell.execute_reply.started": "2021-11-10T10:37:53.656465Z"
211+
"iopub.execute_input": "2021-11-25T10:08:27.359160Z",
212+
"iopub.status.busy": "2021-11-25T10:08:27.358720Z",
213+
"iopub.status.idle": "2021-11-25T10:08:27.480994Z",
214+
"shell.execute_reply": "2021-11-25T10:08:27.480250Z",
215+
"shell.execute_reply.started": "2021-11-25T10:08:27.359134Z"
219216
},
220217
"tags": []
221218
},
@@ -244,11 +241,11 @@
244241
"id": "efe1170d-9f3e-4a5a-ba9f-15869aeeff05",
245242
"metadata": {
246243
"execution": {
247-
"iopub.execute_input": "2021-11-10T10:37:53.762542Z",
248-
"iopub.status.busy": "2021-11-10T10:37:53.761984Z",
249-
"iopub.status.idle": "2021-11-10T10:37:53.784717Z",
250-
"shell.execute_reply": "2021-11-10T10:37:53.783796Z",
251-
"shell.execute_reply.started": "2021-11-10T10:37:53.762516Z"
244+
"iopub.execute_input": "2021-11-25T10:08:27.482492Z",
245+
"iopub.status.busy": "2021-11-25T10:08:27.482130Z",
246+
"iopub.status.idle": "2021-11-25T10:08:27.507031Z",
247+
"shell.execute_reply": "2021-11-25T10:08:27.506093Z",
248+
"shell.execute_reply.started": "2021-11-25T10:08:27.482467Z"
252249
}
253250
},
254251
"outputs": [],
@@ -270,11 +267,11 @@
270267
"id": "3a8f4d82-d8cf-4166-a2ff-1f55974239ff",
271268
"metadata": {
272269
"execution": {
273-
"iopub.execute_input": "2021-11-10T10:37:53.785993Z",
274-
"iopub.status.busy": "2021-11-10T10:37:53.785852Z",
275-
"iopub.status.idle": "2021-11-10T10:37:55.366305Z",
276-
"shell.execute_reply": "2021-11-10T10:37:55.365428Z",
277-
"shell.execute_reply.started": "2021-11-10T10:37:53.785975Z"
270+
"iopub.execute_input": "2021-11-25T10:08:27.508244Z",
271+
"iopub.status.busy": "2021-11-25T10:08:27.507937Z",
272+
"iopub.status.idle": "2021-11-25T10:08:29.812446Z",
273+
"shell.execute_reply": "2021-11-25T10:08:29.811810Z",
274+
"shell.execute_reply.started": "2021-11-25T10:08:27.508225Z"
278275
},
279276
"tags": []
280277
},
@@ -325,18 +322,18 @@
325322
"id": "49b01ed0-7739-4d6e-a0e0-22d95286454e",
326323
"metadata": {
327324
"execution": {
328-
"iopub.execute_input": "2021-11-10T10:37:55.367417Z",
329-
"iopub.status.busy": "2021-11-10T10:37:55.367288Z",
330-
"iopub.status.idle": "2021-11-10T10:38:20.232259Z",
331-
"shell.execute_reply": "2021-11-10T10:38:20.231406Z",
332-
"shell.execute_reply.started": "2021-11-10T10:37:55.367399Z"
325+
"iopub.execute_input": "2021-11-25T10:08:29.814032Z",
326+
"iopub.status.busy": "2021-11-25T10:08:29.813570Z",
327+
"iopub.status.idle": "2021-11-25T10:09:03.921063Z",
328+
"shell.execute_reply": "2021-11-25T10:09:03.920474Z",
329+
"shell.execute_reply.started": "2021-11-25T10:08:29.814006Z"
333330
}
334331
},
335332
"outputs": [
336333
{
337334
"data": {
338335
"application/vnd.jupyter.widget-view+json": {
339-
"model_id": "a7d188ed968147dbbe8a0d36309c09d1",
336+
"model_id": "a386186198b44f6480d086482820c230",
340337
"version_major": 2,
341338
"version_minor": 0
342339
},
@@ -400,11 +397,11 @@
400397
"id": "b913115e-7a8e-424d-a6cd-dfb1a643a240",
401398
"metadata": {
402399
"execution": {
403-
"iopub.execute_input": "2021-11-10T10:38:20.233646Z",
404-
"iopub.status.busy": "2021-11-10T10:38:20.233484Z",
405-
"iopub.status.idle": "2021-11-10T10:38:20.458338Z",
406-
"shell.execute_reply": "2021-11-10T10:38:20.457576Z",
407-
"shell.execute_reply.started": "2021-11-10T10:38:20.233630Z"
400+
"iopub.execute_input": "2021-11-25T10:09:03.922713Z",
401+
"iopub.status.busy": "2021-11-25T10:09:03.922070Z",
402+
"iopub.status.idle": "2021-11-25T10:09:04.214900Z",
403+
"shell.execute_reply": "2021-11-25T10:09:04.214313Z",
404+
"shell.execute_reply.started": "2021-11-25T10:09:03.922690Z"
408405
},
409406
"tags": []
410407
},
@@ -447,11 +444,11 @@
447444
"id": "9e5b261b-05eb-49a3-8ae8-f923f1100acf",
448445
"metadata": {
449446
"execution": {
450-
"iopub.execute_input": "2021-11-10T10:38:20.459753Z",
451-
"iopub.status.busy": "2021-11-10T10:38:20.459278Z",
452-
"iopub.status.idle": "2021-11-10T10:38:20.474136Z",
453-
"shell.execute_reply": "2021-11-10T10:38:20.473433Z",
454-
"shell.execute_reply.started": "2021-11-10T10:38:20.459727Z"
447+
"iopub.execute_input": "2021-11-25T10:09:04.216265Z",
448+
"iopub.status.busy": "2021-11-25T10:09:04.215875Z",
449+
"iopub.status.idle": "2021-11-25T10:09:04.235438Z",
450+
"shell.execute_reply": "2021-11-25T10:09:04.234925Z",
451+
"shell.execute_reply.started": "2021-11-25T10:09:04.216241Z"
455452
},
456453
"tags": []
457454
},
@@ -495,19 +492,19 @@
495492
"id": "7797e54a-c9d8-44f4-bedb-5858bf817826",
496493
"metadata": {
497494
"execution": {
498-
"iopub.execute_input": "2021-11-10T10:38:20.475033Z",
499-
"iopub.status.busy": "2021-11-10T10:38:20.474914Z",
500-
"iopub.status.idle": "2021-11-10T10:38:26.021340Z",
501-
"shell.execute_reply": "2021-11-10T10:38:26.020554Z",
502-
"shell.execute_reply.started": "2021-11-10T10:38:20.475018Z"
495+
"iopub.execute_input": "2021-11-25T10:09:04.236493Z",
496+
"iopub.status.busy": "2021-11-25T10:09:04.236254Z",
497+
"iopub.status.idle": "2021-11-25T10:09:11.219317Z",
498+
"shell.execute_reply": "2021-11-25T10:09:11.218713Z",
499+
"shell.execute_reply.started": "2021-11-25T10:09:04.236472Z"
503500
},
504501
"tags": []
505502
},
506503
"outputs": [
507504
{
508505
"data": {
509506
"text/plain": [
510-
"<matplotlib.lines.Line2D at 0x7f7b1295a550>"
507+
"<matplotlib.lines.Line2D at 0x7efe1957da90>"
511508
]
512509
},
513510
"execution_count": 11,
@@ -548,11 +545,11 @@
548545
"id": "33d1e72e-3537-446a-8d92-2613a88d4b05",
549546
"metadata": {
550547
"execution": {
551-
"iopub.execute_input": "2021-11-10T10:38:26.023977Z",
552-
"iopub.status.busy": "2021-11-10T10:38:26.023380Z",
553-
"iopub.status.idle": "2021-11-10T10:38:26.209339Z",
554-
"shell.execute_reply": "2021-11-10T10:38:26.208547Z",
555-
"shell.execute_reply.started": "2021-11-10T10:38:26.023951Z"
548+
"iopub.execute_input": "2021-11-25T10:09:11.221896Z",
549+
"iopub.status.busy": "2021-11-25T10:09:11.221540Z",
550+
"iopub.status.idle": "2021-11-25T10:09:11.471248Z",
551+
"shell.execute_reply": "2021-11-25T10:09:11.470680Z",
552+
"shell.execute_reply.started": "2021-11-25T10:09:11.221874Z"
556553
},
557554
"tags": []
558555
},
@@ -810,11 +807,11 @@
810807
"id": "6d71b12f-52a9-4401-8530-53e25cc3a113",
811808
"metadata": {
812809
"execution": {
813-
"iopub.execute_input": "2021-11-10T10:38:26.210403Z",
814-
"iopub.status.busy": "2021-11-10T10:38:26.210277Z",
815-
"iopub.status.idle": "2021-11-10T10:38:26.399229Z",
816-
"shell.execute_reply": "2021-11-10T10:38:26.398328Z",
817-
"shell.execute_reply.started": "2021-11-10T10:38:26.210387Z"
810+
"iopub.execute_input": "2021-11-25T10:09:11.472155Z",
811+
"iopub.status.busy": "2021-11-25T10:09:11.472031Z",
812+
"iopub.status.idle": "2021-11-25T10:09:11.721456Z",
813+
"shell.execute_reply": "2021-11-25T10:09:11.720863Z",
814+
"shell.execute_reply.started": "2021-11-25T10:09:11.472137Z"
818815
},
819816
"tags": []
820817
},
@@ -1712,11 +1709,11 @@
17121709
"id": "81bb4144-64ae-4fa3-b43d-2742597f2956",
17131710
"metadata": {
17141711
"execution": {
1715-
"iopub.execute_input": "2021-11-10T10:38:26.400323Z",
1716-
"iopub.status.busy": "2021-11-10T10:38:26.400199Z",
1717-
"iopub.status.idle": "2021-11-10T10:38:26.414623Z",
1718-
"shell.execute_reply": "2021-11-10T10:38:26.413956Z",
1719-
"shell.execute_reply.started": "2021-11-10T10:38:26.400308Z"
1712+
"iopub.execute_input": "2021-11-25T10:09:11.722784Z",
1713+
"iopub.status.busy": "2021-11-25T10:09:11.722429Z",
1714+
"iopub.status.idle": "2021-11-25T10:09:11.748100Z",
1715+
"shell.execute_reply": "2021-11-25T10:09:11.747586Z",
1716+
"shell.execute_reply.started": "2021-11-25T10:09:11.722760Z"
17201717
},
17211718
"tags": []
17221719
},
@@ -1744,11 +1741,11 @@
17441741
"id": "fb5700ab-c302-4005-8ff7-216d9d8ee923",
17451742
"metadata": {
17461743
"execution": {
1747-
"iopub.execute_input": "2021-11-10T10:38:26.415438Z",
1748-
"iopub.status.busy": "2021-11-10T10:38:26.415327Z",
1749-
"iopub.status.idle": "2021-11-10T10:38:26.508725Z",
1750-
"shell.execute_reply": "2021-11-10T10:38:26.508140Z",
1751-
"shell.execute_reply.started": "2021-11-10T10:38:26.415425Z"
1744+
"iopub.execute_input": "2021-11-25T10:09:11.748974Z",
1745+
"iopub.status.busy": "2021-11-25T10:09:11.748832Z",
1746+
"iopub.status.idle": "2021-11-25T10:09:11.853498Z",
1747+
"shell.execute_reply": "2021-11-25T10:09:11.852571Z",
1748+
"shell.execute_reply.started": "2021-11-25T10:09:11.748955Z"
17521749
},
17531750
"tags": []
17541751
},
@@ -1776,11 +1773,11 @@
17761773
"id": "65aa3350-b6cd-43b9-a16f-fbd27660852d",
17771774
"metadata": {
17781775
"execution": {
1779-
"iopub.execute_input": "2021-11-10T10:38:26.509708Z",
1780-
"iopub.status.busy": "2021-11-10T10:38:26.509583Z",
1781-
"iopub.status.idle": "2021-11-10T10:38:26.601658Z",
1782-
"shell.execute_reply": "2021-11-10T10:38:26.600745Z",
1783-
"shell.execute_reply.started": "2021-11-10T10:38:26.509695Z"
1776+
"iopub.execute_input": "2021-11-25T10:09:11.855585Z",
1777+
"iopub.status.busy": "2021-11-25T10:09:11.854999Z",
1778+
"iopub.status.idle": "2021-11-25T10:09:11.942289Z",
1779+
"shell.execute_reply": "2021-11-25T10:09:11.941660Z",
1780+
"shell.execute_reply.started": "2021-11-25T10:09:11.855547Z"
17841781
},
17851782
"tags": []
17861783
},
@@ -1809,11 +1806,11 @@
18091806
"id": "f02bb79c-62b7-4660-8c6b-7f96133271b9",
18101807
"metadata": {
18111808
"execution": {
1812-
"iopub.execute_input": "2021-11-10T10:38:26.602840Z",
1813-
"iopub.status.busy": "2021-11-10T10:38:26.602704Z",
1814-
"iopub.status.idle": "2021-11-10T10:38:26.899558Z",
1815-
"shell.execute_reply": "2021-11-10T10:38:26.898699Z",
1816-
"shell.execute_reply.started": "2021-11-10T10:38:26.602824Z"
1809+
"iopub.execute_input": "2021-11-25T10:09:11.943436Z",
1810+
"iopub.status.busy": "2021-11-25T10:09:11.943198Z",
1811+
"iopub.status.idle": "2021-11-25T10:09:12.141640Z",
1812+
"shell.execute_reply": "2021-11-25T10:09:12.141073Z",
1813+
"shell.execute_reply.started": "2021-11-25T10:09:11.943413Z"
18171814
},
18181815
"tags": []
18191816
},
@@ -1904,11 +1901,11 @@
19041901
"id": "f6547aaa-610b-47e6-b93c-d4002620b96b",
19051902
"metadata": {
19061903
"execution": {
1907-
"iopub.execute_input": "2021-11-10T10:38:26.900585Z",
1908-
"iopub.status.busy": "2021-11-10T10:38:26.900451Z",
1909-
"iopub.status.idle": "2021-11-10T10:38:27.268535Z",
1910-
"shell.execute_reply": "2021-11-10T10:38:27.267657Z",
1911-
"shell.execute_reply.started": "2021-11-10T10:38:26.900569Z"
1904+
"iopub.execute_input": "2021-11-25T10:09:12.142774Z",
1905+
"iopub.status.busy": "2021-11-25T10:09:12.142517Z",
1906+
"iopub.status.idle": "2021-11-25T10:09:12.554670Z",
1907+
"shell.execute_reply": "2021-11-25T10:09:12.554171Z",
1908+
"shell.execute_reply.started": "2021-11-25T10:09:12.142751Z"
19121909
},
19131910
"tags": []
19141911
},

0 commit comments

Comments
 (0)