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Add sequence ID to summary statistics to make it easier to find results
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newmap/unique_counts.py

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@@ -163,6 +163,7 @@ def write_unique_counts(fasta_filename: Path,
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segment_unique_counts.tofile(unique_count_file)
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print_summary_statisitcs(verbose,
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sequence_segment.id,
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total_unique_lengths_count,
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total_ambiguous_positions,
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total_no_unique_lengths_count,
@@ -555,13 +556,17 @@ def get_ambiguous_positions(sequence_segment: SequenceSegment,
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def print_summary_statisitcs(verbose: bool,
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sequence_id: bytes,
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total_unique_lengths_count: int,
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total_ambiguous_positions: int,
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total_no_unique_lengths_count: int,
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max_length_found: int,
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min_length_found: int):
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if (verbose and
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total_unique_lengths_count):
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verbose_print(verbose,
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f"Finished writing minimum unique lengths for sequence "
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f"ID: {sequence_id.decode()}")
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verbose_print(verbose,
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f"{total_unique_lengths_count} unique lengths found")
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verbose_print(verbose,

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