Update Github actions to checkout AvxWindowFmIndex submodule

Author: EricR86

.github/workflows/continuous-integration-workflow.yml

@@ -17,6 +17,7 @@ jobs:
       - uses: actions/checkout@v3
         with:
           fetch-depth: 0
+          submodules: recursive
       # Fix ownership of the checkout dir
       - name: Set ownership
         run: |
@@ -29,7 +30,7 @@ jobs:
           flake8 . --exclude 'docs/source/conf.py' --count --statistics
       - name: Type check with mypy
         run: |
-          mypy newmap test
+          mypy newmap tests
       - name: Build AvxWindowFmIndex libraries
         run: |
           ./build_libraries.sh
@@ -55,6 +56,7 @@ jobs:
     - uses: actions/checkout@v3
       with:
         fetch-depth: 0
+        submodules: recursive
     - name: Set up Python
       uses: actions/setup-python@v4
       with:

.github/workflows/python-publish.yml

@@ -15,6 +15,8 @@ jobs:
       with:
         # Gets tags for versioning information
         fetch-depth: 0
+        # Get AvxWindowFmIndex submodule
+        submodules: recursive
     # Fix ownership of the checkout dir
     - name: Set ownership
       run: |