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DESCRIPTION

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Package: TFregulomeR
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Type: Package
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Title: Flexible Characterisation of Transcription Factor Binding Partners and Binding Motifs using Cell-specific Cistrome and Methylome Meta-data
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Version: 1.0.1
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Version: 1.0.0
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Description: An R-package linked to a large timely-updated compendium of cistrome and methylome datasets, implemented with functionalities that facilitate the manipulation and analysis of TFBS and methylome meta-data. In particular, TFregulomeR permits the characterisation of TF binding partners and cell-specific TFBSs, along with the study of TF’s functions in the context of different partners’ combinations and DNA methylation levels.
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Authors@R: c(person("Quy Xiao Xuan", "Lin", email = "linquyzju@gmail.com", role = c("aut", "cre")),
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person("Sudhakar", "Jha", email = "csisjha@nus.edu.sg", role = "ctb"),

NEWS

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Changes in version 1.0.1 (2019-05-07)
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+ changed genomeAnnotate in line with the updated UCSC gene names
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Changes in version 1.0.0 (2019-05-06)
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Changes in version 1.0.0 (2019-05-07)
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+ stable version released
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Changes in version 0.99.0 (2019-01-30)
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+ before release

README.md

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## Release notes
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#### Current TFregulomeR release version: 1.0.1 (Updated on 7 May 2019).
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v1.0.1 note: UCSC changed hg38 gene name in line with Ensembl, and *genomeAnnotate()* function has been updated accordingly.
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#### Current TFregulomeR release version: 1.0.0 (Updated on 7 May 2019).
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v1.0.0 note: stable release version.
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