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README.md

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# Cell-cell communication
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[![dockerhub-container](https://img.shields.io/badge/dockerhub-container-yellowgreen?logo=docker)](https://hub.docker.com/repository/docker/shaoxin0801/cell-cell-communication)
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[![dockerhub-container](https://img.shields.io/badge/dockerhub-container-yellowgreen?logo=docker)](https://hub.docker.com/repository/docker/shaoxin0801/cell-cell-communication) [![jupyter](https://img.shields.io/badge/Computational--tools-cell--cell%20communication-yellow?logo=jupyter)](https://github.com/shaoxin0801/Cell-cell-communication/tree/main/method)
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Collection of computational tools for [cell-cell communication inference for single-cell](https://pubmed.ncbi.nlm.nih.gov/32435978/) and spatially resolved omics, including epigenomics, transcriptomics, proteomics, metabolomics, etc. Welcome contribution. Please folk this repository and create a pull request if you have an update. Please Cite us by "Shao, X. and Fan, X. Collection of computational tools for cell-cell communication inference for single-cell and spatially resolved omics (2022)".
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data/scRNA/example.rda

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data/scRNA/sc_data.csv

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