Merge pull request #3464 from jessica-mitchell/fix-EI-example

jessica-mitchell · web-flow · commit 66cb23b25a31 · 2025-04-09T12:11:41.000+02:00
Fix example for EI clustered network
diff --git a/pynest/examples/EI_clustered_network/README.rst b/pynest/examples/EI_clustered_network/README.rst
@@ -16,12 +16,12 @@ If you use this code, we ask you to cite the paper by Rostami et al. [1]_ and th
 File structure
 --------------
 
-* :doc:`run_simulation_EI.py <run_simulation_EI>`: an example script to try out the EI-clustered circuit model
-* :doc:`network_EI.py <network_EI>`: the main ``Network`` class with functions to build and simulate the network
-* :doc:`helper_EI.py <helper_EI>`: helper functions for calculation of synaptic weights and currents and plot function for raster plots
-* :doc:`network_params_EI.py <network_params_EI>`: network and neuron parameters
-* :doc:`stimulus_params_EI.py <stimulus_params_EI>`: parameters for optional external stimulation
-* :doc:`sim_params_EI.py <sim_params_EI>`: simulation parameters
+* :doc:`run_simulation.py <run_simulation>`: an example script to try out the EI-clustered circuit model
+* :doc:`network.py <network>`: the main ``Network`` class with functions to build and simulate the network
+* :doc:`helper.py <helper>`: helper functions for calculation of synaptic weights and currents and plot function for raster plots
+* :doc:`network_params.py <network_params>`: network and neuron parameters
+* :doc:`stimulus_params.py <stimulus_params>`: parameters for optional external stimulation
+* :doc:`sim_params.py <sim_params>`: simulation parameters
 
 Running the simulation
 ----------------------
diff --git a/pynest/examples/EI_clustered_network/helper.py b/pynest/examples/EI_clustered_network/helper.py
@@ -1,6 +1,6 @@
 # -*- coding: utf-8 -*-
 #
-# helper_EI.py
+# helper.py
 #
 # This file is part of NEST.
 #
diff --git a/pynest/examples/EI_clustered_network/network.py b/pynest/examples/EI_clustered_network/network.py
@@ -1,6 +1,6 @@
 # -*- coding: utf-8 -*-
 #
-# network_EI.py
+# network.py
 #
 # This file is part of NEST.
 #
diff --git a/pynest/examples/EI_clustered_network/network_params.py b/pynest/examples/EI_clustered_network/network_params.py
@@ -1,6 +1,6 @@
 # -*- coding: utf-8 -*-
 #
-# network_params_EI.py
+# network_params.py
 #
 # This file is part of NEST.
 #
diff --git a/pynest/examples/EI_clustered_network/run_simulation.py b/pynest/examples/EI_clustered_network/run_simulation.py
@@ -1,6 +1,6 @@
 # -*- coding: utf-8 -*-
 #
-# run_simulation_EI.py
+# run_simulation.py
 #
 # This file is part of NEST.
 #
diff --git a/pynest/examples/EI_clustered_network/sim_params.py b/pynest/examples/EI_clustered_network/sim_params.py
@@ -1,6 +1,6 @@
 # -*- coding: utf-8 -*-
 #
-# sim_params_EI.py
+# sim_params.py
 #
 # This file is part of NEST.
 #
diff --git a/pynest/examples/EI_clustered_network/stimulus_params.py b/pynest/examples/EI_clustered_network/stimulus_params.py
@@ -1,6 +1,6 @@
 # -*- coding: utf-8 -*-
 #
-# stimulus_params_EI.py
+# stimulus_params.py
 #
 # This file is part of NEST.
 #

Original file line number	Diff line number	Diff line change
`@@ -1,6 +1,6 @@`
`1`	`1`	`# -- coding: utf-8 --`
`2`	`2`	`#`
`3`		`-# helper_EI.py`
	`3`	`+# helper.py`
`4`	`4`	`#`
`5`	`5`	`# This file is part of NEST.`
`6`	`6`	`#`
Original file line number	Diff line number	Diff line change
`@@ -1,6 +1,6 @@`
`1`	`1`	`# -- coding: utf-8 --`
`2`	`2`	`#`
`3`		`-# network_EI.py`
	`3`	`+# network.py`
`4`	`4`	`#`
`5`	`5`	`# This file is part of NEST.`
`6`	`6`	`#`
Original file line number	Diff line number	Diff line change
`@@ -1,6 +1,6 @@`
`1`	`1`	`# -- coding: utf-8 --`
`2`	`2`	`#`
`3`		`-# network_params_EI.py`
	`3`	`+# network_params.py`
`4`	`4`	`#`
`5`	`5`	`# This file is part of NEST.`
`6`	`6`	`#`
Original file line number	Diff line number	Diff line change
`@@ -1,6 +1,6 @@`
`1`	`1`	`# -- coding: utf-8 --`
`2`	`2`	`#`
`3`		`-# run_simulation_EI.py`
	`3`	`+# run_simulation.py`
`4`	`4`	`#`
`5`	`5`	`# This file is part of NEST.`
`6`	`6`	`#`
Original file line number	Diff line number	Diff line change
`@@ -1,6 +1,6 @@`
`1`	`1`	`# -- coding: utf-8 --`
`2`	`2`	`#`
`3`		`-# sim_params_EI.py`
	`3`	`+# sim_params.py`
`4`	`4`	`#`
`5`	`5`	`# This file is part of NEST.`
`6`	`6`	`#`
Original file line number	Diff line number	Diff line change
`@@ -1,6 +1,6 @@`
`1`	`1`	`# -- coding: utf-8 --`
`2`	`2`	`#`
`3`		`-# stimulus_params_EI.py`
	`3`	`+# stimulus_params.py`
`4`	`4`	`#`
`5`	`5`	`# This file is part of NEST.`
`6`	`6`	`#`