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Merge pull request #21 from SimonRouet/flowering
Complete example/calibration_GEVES_2021 with files used in the article Rouet et al. (2022) in in silico Plants
2 parents 8a1a3a6 + de1880b commit a249105

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example/calibration_GEVES_2021/inputs/plan_simulation_calibration_GEVES.csv

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example/calibration_GEVES_2021/inputs/plan_simulation_sensitivity_ploudaniel_2009.csv

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example/calibration_GEVES_2021/inputs/plan_simulation_sensitivity_ploudaniel_2015.csv

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example/calibration_GEVES_2021/inputs/plan_simulation_sensitivity_theix_2009.csv

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example/calibration_GEVES_2021/inputs/plan_simulation_validation_GEVES.csv

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example/calibration_GEVES_2021/run_lgrass_GEVES.py

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@@ -18,7 +18,7 @@ def run_lgrass(scenario_id=1, inputs_dir_path='inputs', outputs_dir_path='output
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"""
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# Scenario to be run
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scenarii_df = pd.read_csv(os.path.join('inputs', 'plan_simulation_calibration_GEVES.csv'), index_col='Scenario')
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scenarii_df = pd.read_csv(os.path.join(inputs_dir_path, 'plan_simulation_calibration_GEVES.csv'), index_col='Scenario')
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scenario = scenarii_df.loc[scenario_id].to_dict()
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scenario_name = scenario['name']
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lgrass/lgrass.lpy

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@@ -1411,7 +1411,7 @@ Feuille(X, X_apex, X_phytomere):
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X.TailleEmergence = Seuil[X.id_plante][X.id_talle]
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TrueAge = X.age - dt_eff #On pourrait affiner la determination de TrueAge qui en realite a eu lieu entre age-dt_eff et age-2dt_eff (soit on prend la moyenne soit au prorata des longueurs)
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tmax_potcroiss = 166.588 #conversion des C jour en heures pour manip a 17C 118*24/17
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tmax_potcroiss = 166.588 #conversion des °C jour en heures pour manip a 17°C 118*24/17
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lmax_potcroiss = 338.5554 # mm
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if option_profile == "triangular":

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