udpate news, cran comments, codemeta.json

Author: sckott

DESCRIPTION

@@ -5,7 +5,7 @@ Description: Interacts with a suite of web 'APIs' for taxonomic tasks,
     species names, getting taxonomic hierarchies, fetching downstream and
     upstream taxonomic names, getting taxonomic synonyms, converting
     scientific to common names and vice versa, and more.
-Version: 0.9.95.93
+Version: 0.9.96
 License: MIT + file LICENSE
 URL: https://docs.ropensci.org/taxize (website),
     https://github.com/ropensci/taxize (devel),
@@ -104,7 +104,6 @@ Suggests:
     vcr
 RoxygenNote: 7.1.0
 Roxygen: list(markdown = TRUE)
-Remotes: ropensci/natserv
 X-schema.org-applicationCategory: Taxonomy
 X-schema.org-keywords: taxonomy, biology, nomenclature, JSON, API, web, api-client, identifiers, species, names
 X-schema.org-isPartOf: https://ropensci.org

NEWS.md

@@ -1,3 +1,20 @@
+taxize 0.9.96
+=============
+
+### NEW FEATURES
+
+* NatureServe has a new API version; the package natserv (https://docs.ropensci.org/natserv/) has a complete overhaul for the new API - taxize interfaces to NatureServe updated. Only user facing change should be that we've moved to using just the final numeric part of the NatureServe taxonomic identifiers as `ELEMENT_GLOBAL.2.` part is redundant for every identifier (#823)
+
+### MINOR IMPROVEMENTS
+
+* `rankagg()` and `tax_agg()` fixes: `rankagg()` examples now conditional on availability of `vegan` as it should be, and now real abundance data are used in the example. `tax_agg()` fixes species name ordering in `dune` data  (#822) work by @jarioksa
+
+### BUG FIXES
+
+* fixed a bug in `class2tree()` (#818) (#820) thx to @adriangeerre for the report & the fix by @trvinh
+* fix to `worms_downstream()`: user encountered a rank name ("phylum (division)") we hadn't dealt with yet for worms (#821) thx @msweetlove for the report
+
+
 taxize 0.9.95
 =============
 

codemeta.json

@@ -10,14 +10,14 @@
   "codeRepository": "https://github.com/ropensci/taxize",
   "issueTracker": "https://github.com/ropensci/taxize/issues",
   "license": "https://spdx.org/licenses/MIT",
-  "version": "0.9.95",
+  "version": "0.9.96",
   "programmingLanguage": {
     "@type": "ComputerLanguage",
     "name": "R",
-    "version": "3.6.3",
+    "version": "4.0.0",
     "url": "https://r-project.org"
   },
-  "runtimePlatform": "R version 3.6.3 Patched (2020-03-11 r78281)",
+  "runtimePlatform": "R version 4.0.0 (2020-04-24)",
   "provider": {
     "@id": "https://cran.r-project.org",
     "@type": "Organization",
@@ -376,7 +376,7 @@
       "@type": "SoftwareApplication",
       "identifier": "natserv",
       "name": "natserv",
-      "version": ">= 0.3.0",
+      "version": ">= 1.0.0",
       "provider": {
         "@id": "https://cran.r-project.org",
         "@type": "Organization",
@@ -453,7 +453,7 @@
   ],
   "releaseNotes": "https://github.com/ropensci/taxize/blob/master/NEWS.md",
   "readme": "https://github.com/ropensci/taxize/blob/master/README.md",
-  "fileSize": "1835.786KB",
+  "fileSize": "1843.575KB",
   "citation": [
     {
       "@type": "ScholarlyArticle",

cran-comments.md

@@ -1,7 +1,7 @@
 ## Test environments
 
-* local OS X install, R 3.6.3 Patched
-* ubuntu 16.04 (on travis-ci), R 3.6.3
+* local OS X install, R 4.0.0
+* ubuntu 16.04 (on travis-ci), R 4.0.0
 * win-builder (devel and release)
 
 ## R CMD check results
@@ -12,11 +12,12 @@
 
 * I have run R CMD check on the 23 downstream dependencies
 (<https://github.com/ropensci/taxize/blob/master/revdep/README.md>);
-there were no errors.
+there were no errors related to taxize.
 
 ------
 
-This version includes a fix for a test that was failing on CRAN recently, and a couple of new functions.
+This version includes a number of bug fixes and integration of a new 
+package API in the natserv R package recently updated on CRAN.
 
 Thanks!
 Scott Chamberlain