Merge pull request #46 from Durbadal0/main

Updated tests functions

Author: GregFa

test/kinship_test.jl

@@ -30,7 +30,7 @@ function kinship_test(kinmat::Matrix{Float64}, testname::String)
         println("Test kinship dimensions: ", @test size(kinmat,1)==size(kinmat,2))
         # println("Test range: ", @test (maximum(kinmat)<=1.0) && (minimum(kinmat)>=-1.0))
         println("Test diagonal: ", @test diag(kinmat) ≈ ones(size(kinmat,1)))  
-        println("Test diagonal: ", @test isposdef(kinmat .+ 0.001))  
+        println("Test diagonal: ", @test isposdef(kinmat + 0.001*Matrix{Float64}(I, size(kinmat,1), size(kinmat,1))))  
 
     end
 
@@ -94,10 +94,6 @@ kinship_test(K1, "kinship_std()")
 # Test: shrinkg #
 #################
 
-K1 = shrinkg(kinship_man, 10, geno1)
-K2 = shrinkg(kinship_man, 10, geno2)
-
-kinship_test(K1, "shrinkg()")
 
 
 

test/runtests.jl

@@ -14,6 +14,7 @@ using DelimitedFiles
 
 @testset "BigRiverQTL" begin 
     include("kinship_test.jl")
-    include("datastruct_test.jl")
+    include("datastruc_test.jl")
+    include("plots_test.jl")
 
 end