smFISH decoding#82

Open

mspend wants to merge 15 commits intoQI2lab:mainfrom

mspend:display_smFISH_results_one_tile

Commits on May 21, 2025

modified display_results method in PixelDecoder to display all bits in napari
mspend
committed

Commits on May 27, 2025

Commits on May 28, 2025

fixed parameters passed into decode_one_tile function
mspend
committed

Commits on Jun 10, 2025

added a bunch of print statements to assess logic flow
mspend
committed

Commits on Jun 30, 2025

split the decoded image into its 16 bits in display_results method in PixelDecoder.py
mspend
committed

Commits on Jul 1, 2025

made sure the dimension of the decoded image and what Napari expects match to resolve an error
mspend
committed

Commits on Jul 3, 2025

Commits on Jul 4, 2025

changed distance threshold
mspend
committed

Commits on Jul 21, 2025

new threshold
mspend
committed

Commits on Jul 29, 2025