Add Chapter 2 Documentation: Extending Hierarchical Model to Correlated Biomarkers #841
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| # adapted from https://github.com/RMI-PACTA/actions/blob/main/.github/workflows/R-semver-check.yml | |
| on: | |
| pull_request: | |
| branches: | |
| - main | |
| name: Version increment check | |
| jobs: | |
| version-check: | |
| if: ${{ github.event_name == 'pull_request' }} | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: checkout working HEAD | |
| uses: actions/checkout@v4 | |
| with: | |
| ref: ${{ github.event.pull_request.head.ref }} | |
| sparse-checkout: | | |
| DESCRIPTION | |
| path: working | |
| - name: checkout base HEAD | |
| uses: actions/checkout@v4 | |
| with: | |
| ref: ${{ github.event.pull_request.base.ref }} | |
| sparse-checkout: | | |
| DESCRIPTION | |
| path: compare | |
| - name: show files | |
| run: | | |
| ls -lR working compare | |
| echo "\nWORKING:\n" | |
| cat working/DESCRIPTION | |
| echo "\nCOMPARE:\n" | |
| cat compare/DESCRIPTION | |
| - name: Setup R | |
| uses: r-lib/actions/setup-r@v2 | |
| with: | |
| use-public-rspm: true | |
| - name: compare versions | |
| run: | | |
| Rscript -e " \ | |
| install.packages('desc'); \ | |
| working_version <- desc::desc_get_version('working/DESCRIPTION'); \ | |
| message('PR branch version: ', working_version); \ | |
| compare_version <- desc::desc_get_version('compare/DESCRIPTION'); \ | |
| message('main branch version: ', compare_version); \ | |
| if (working_version <= compare_version) { \ | |
| message('Call usethis::use_version() in the R Console to increment the "dev" version number.'); \ | |
| stopifnot(working_version > compare_version); \ | |
| } else message('All set!'); \ | |
| " |