v2.3.0

rernst released this 28 Sep 08:05

· 110 commits to develop since this release

7b039bd

New features:

Sex aware variant calling + new haplotypecaller scala script -> add CALLING_SEXAWARE to ini
Using relative paths for qscripts and IAP scripts
Save submission log automatically
Add flagstat stats to bamMetrics -> needs new version of bamMetrics

Bug fixes:

Delly job submission
Delly chromosome chunks

Assets 2