Automated Nextstrain Clade Monitoring & Variant Definition Creation#6

Open

gordonkoehn wants to merge 53 commits intomasterfrom

feat/nextclade_monitor

Commits on Jul 14, 2025

WIP - of Cornelius Roemer's draft
Gordon J. Köhn
committed
temporarily chaning branch to push to
Gordon J. Köhn
committed
move to right dir
Gordon J. Köhn
committed
Update Nextstrain clade tracking data [skip ci]
actions-user
committed
enrich
Gordon J. Köhn
committed
enrich with display names and data
Gordon J. Köhn
committed
Update Nextstrain clade tracking data [skip ci]
actions-user
committed
refine optics
Gordon J. Köhn
committed
Update Nextstrain clade tracking data [skip ci]
actions-user
committed
remove clutter
Gordon J. Köhn
committed
with day
Gordon J. Köhn
committed
add automatic PR
Gordon J. Köhn
committed
tate
Gordon J. Köhn
committed
add retry
Gordon J. Köhn
committed

Commits on Jul 15, 2025

Update Nextstrain clade tracking data [skip ci]
actions-user
committed
only one variant
Gordon J. Köhn
committed
Update Nextstrain clade tracking data [skip ci]
actions-user
committed
Add temporary push trigger to variant-creator for testing
Gordon J. Köhn
committed
Fix variant creator workflow: checkout master + add _bot suffix
Gordon J. Köhn
committed
test variant
Gordon J. Köhn
committed
Update Nextstrain clade tracking data [skip ci]
actions-user
committed
test
Gordon J. Köhn
committed
Update Nextstrain clade tracking data [skip ci]
actions-user
committed
Add open issue check to variant creator
Gordon J. Köhn
committed
single change
Gordon J. Köhn
committed
Update Nextstrain clade tracking data [skip ci]
actions-user
committed
test
Gordon J. Köhn
committed
Major improvement: Process ALL open issues with variant-creation-needed label
Gordon J. Köhn
committed
🚀 FINAL: Complete automated variant creation workflow
Gordon J. Köhn
committed
clean test
Gordon J. Köhn
committed
Update Nextstrain clade tracking data [skip ci]
actions-user
committed

Commits on Jul 22, 2025

to 7 days
Gordon J. Köhn
committed
✨ Enhance workflows with CovSpectrum links and improved notifications
Gordon J. Köhn
committed
Update Nextstrain clade tracking data [skip ci]
actions-user
committed
🔧 Fix retry timing and reorganize CovSpectrum links
Gordon J. Köhn
committed
🔄 Merge remote changes - resolve clade tracking conflict
Gordon J. Köhn
committed
test
Gordon J. Köhn
committed
Update Nextstrain clade tracking data [skip ci]
actions-user
committed
test
Gordon J. Köhn
committed
test
Gordon J. Köhn
committed
Merge branch 'feat/nextclade_monitor' of https://github.com/cbg-ethz/cowwid into feat/nextclade_monitor
Gordon J. Köhn
committed
Update Nextstrain clade tracking data [skip ci]
actions-user
committed
test
Gordon J. Köhn
committed
Update Nextstrain clade tracking data [skip ci]
actions-user
committed
test final
Gordon J. Köhn
committed
Update Nextstrain clade tracking data [skip ci]
actions-user
committed
test
Gordon J. Köhn
committed
test
Gordon J. Köhn
committed
test
Gordon J. Köhn
committed
test
Gordon J. Köhn
committed
Update Nextstrain clade tracking data [skip ci]
actions-user
committed
FINNAL
Gordon J. Köhn
committed
Update Nextstrain clade tracking data [skip ci]
actions-user
committed