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@yarikoptic yarikoptic commented Mar 18, 2025

ATM it is a standalone helper . We should RF it into

  • making an internal command under dandi service-scripts
  • in dandi-schema
    • see where it could be placed (likely along with other standards)
    • see it summarized in dandi-schema's aggregate_assets_summary
  • here: using extraction code for each nwb assets and add to metadata information about extensions
  • drop commit adding that dump dandisets-20240212-all.json -- not worth carrying around, should be
  • repopulate metadata through assets/dandisets (draft versions at least)?
here is the current counts (how many dandisets use) for each used extension
$ grep name dandisets-20240212-all.json  | sort | uniq -c  | sort -n -r 
    368       "name": "core",
    365       "name": "hdmf-common",
    315       "name": "hdmf-experimental",
     21       "name": "ndx-mies",
     20       "name": "ndx-dandi-icephys",
     18       "name": "ndx-events",
      9       "name": "ndx-spectrum",
      9       "name": "ndx-ellipse-eye-tracking",
      9       "name": "ndx-aibs-stimulus-template",
      8       "name": "ndx-aibs-ecephys",
      7       "name": "ndx-multichannel-volume",
      6       "name": "ndx-pose",
      6       "name": "ndx-icephys-meta",
      6       "name": "ndx-grayscalevolume",
      6       "name": "ndx-franklab-novela",
      6       "name": "ndx-aibs-behavior-ophys",
      5       "name": "ndx-fiber-photometry",
      5       "name": "ndx-aibs-ophys-event-detection",
      4       "name": "ndx-photometry",
      2       "name": "ndx-sound",
      2       "name": "ndx-ibl-metadata",
      1       "name": "uobrainflex_metadata",
      1       "name": "ndx-xarray",
      1       "name": "ndx-turner-metadata",
      1       "name": "ndx-subjects",
      1       "name": "ndx-simulation-output",
      1       "name": "ndx-photometry-namlab",
      1       "name": "ndx-patterned-ogen",
      1       "name": "ndx-nirs",
      1       "name": "ndx-miniscope",
      1       "name": "ndx-microscopy",
      1       "name": "ndx-lnmc-icephys-hierarchy",
      1       "name": "ndx-ibl",
      1       "name": "ndx-harvey-swac",
      1       "name": "ndx-extract",
      1       "name": "ndx-eventlog-namlab",
      1       "name": "ndx-depth-moseq"

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codecov bot commented Mar 18, 2025

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 88.63%. Comparing base (cb1712d) to head (82ab2c5).
Report is 6 commits behind head on master.

Additional details and impacted files
@@            Coverage Diff             @@
##           master    #1593      +/-   ##
==========================================
+ Coverage   88.55%   88.63%   +0.07%     
==========================================
  Files          78       78              
  Lines       10872    10872              
==========================================
+ Hits         9628     9636       +8     
+ Misses       1244     1236       -8     
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