Check sdf load error (do not merge) #6199
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| name: Indigo CI | ||
|
Check failure on line 1 in .github/workflows/indigo-ci.yaml
|
||
| env: | ||
| OS_NAME_MAPPING_JSON: '{"ubuntu-latest": "linux", "windows-latest": "windows", "macos-13": "macos"}' | ||
| on: | ||
| push: | ||
| branches: | ||
| - master | ||
| tags: | ||
| - 'indigo-*' | ||
| workflow_dispatch: | ||
| pull_request: | ||
| repository_dispatch: | ||
| jobs: | ||
| build_indigo_libs_x86_64: | ||
| strategy: | ||
| fail-fast: false | ||
| matrix: | ||
| os: [ macos-13, ubuntu-latest, windows-latest ] | ||
| runs-on: ${{ matrix.os }} | ||
| steps: | ||
| - name: Checkout | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| lfs: false | ||
| fetch-depth: 500 | ||
| - name: Git fetch tags | ||
| run: | | ||
| git config --global --add safe.directory '*' | ||
| git fetch --tags -f | ||
| - name: Build Linux | ||
| if: ${{ startsWith(matrix.os, 'ubuntu') }} | ||
| uses: docker://epmlsop/buildpack-centos7:latest | ||
| with: | ||
| args: > | ||
| /bin/sh -c " | ||
| mkdir build && | ||
| cd build && | ||
| cmake .. -DBUILD_INDIGO=ON -DBUILD_INDIGO_WRAPPERS=OFF -DBUILD_INDIGO_UTILS=OFF -DBUILD_BINGO=OFF -DBUILD_BINGO_ELASTIC=OFF && | ||
| cmake --build . --config Release --target all -- -j $(nproc) && | ||
| ctest --verbose | ||
| " | ||
| - name: Build macOS | ||
| if: ${{ startsWith(matrix.os, 'macos') }} | ||
| run: | | ||
| mkdir build | ||
| cd build | ||
| cmake .. -DBUILD_INDIGO=ON -DBUILD_INDIGO_WRAPPERS=OFF -DBUILD_INDIGO_UTILS=OFF -DBUILD_BINGO=OFF -DBUILD_BINGO_ELASTIC=OFF | ||
| cmake --build . --config Release --target all -- -j $(sysctl -n hw.logicalcpu) | ||
| ctest --verbose | ||
| - name: Build Windows | ||
| if: ${{ startsWith(matrix.os, 'windows') }} | ||
| run: | | ||
| mkdir build | ||
| cd build | ||
| cmake .. -DBUILD_INDIGO=ON -DBUILD_INDIGO_WRAPPERS=OFF -DBUILD_INDIGO_UTILS=OFF -DBUILD_BINGO=OFF -DBUILD_BINGO_ELASTIC=OFF | ||
| cmake --build . --config Release --target ALL_BUILD | ||
| ctest --verbose -C Release | ||
| - name: Upload artifacts | ||
| uses: actions/upload-artifact@v4 | ||
| with: | ||
| name: indigo-libs-${{ fromJSON(env.OS_NAME_MAPPING_JSON)[matrix.os] }}-x86_64 | ||
| path: dist | ||
| build_indigo_libs_i386: | ||
| strategy: | ||
| fail-fast: false | ||
| matrix: | ||
| os: [ windows-latest ] | ||
| runs-on: ${{ matrix.os }} | ||
| steps: | ||
| - name: Checkout | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| lfs: false | ||
| fetch-depth: 500 | ||
| - name: Git fetch tags | ||
| run: | | ||
| git config --global --add safe.directory '*' | ||
| git fetch --tags -f | ||
| - name: Build Windows | ||
| if: ${{ startsWith(matrix.os, 'windows') }} | ||
| run: | | ||
| mkdir build | ||
| cd build | ||
| cmake .. -G "Visual Studio 17 2022" -A Win32 -DBUILD_INDIGO=ON -DBUILD_INDIGO_WRAPPERS=OFF -DBUILD_INDIGO_UTILS=OFF -DBUILD_BINGO=OFF -DBUILD_BINGO_ELASTIC=OFF -DCMAKE_SYSTEM_PROCESSOR_LOWER=i386 | ||
| cmake --build . --config Release --target ALL_BUILD | ||
| ctest --verbose -C Release | ||
| - name: Upload artifacts | ||
| uses: actions/upload-artifact@v4 | ||
| with: | ||
| name: indigo-libs-${{ fromJSON(env.OS_NAME_MAPPING_JSON)[matrix.os] }}-i386 | ||
| path: dist | ||
| build_indigo_libs_aarch64: | ||
| strategy: | ||
| fail-fast: false | ||
| matrix: | ||
| os: [ macos-13, ubuntu-latest ] | ||
| runs-on: ${{ matrix.os }} | ||
| steps: | ||
| - name: Checkout | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| lfs: false | ||
| fetch-depth: 500 | ||
| - name: Git fetch tags | ||
| run: | | ||
| git config --global --add safe.directory '*' | ||
| git fetch --tags -f | ||
| - name: Build Linux | ||
| if: ${{ startsWith(matrix.os, 'ubuntu') }} | ||
| uses: docker://epmlsop/buildpack-arm64:latest | ||
| with: | ||
| args: > | ||
| /bin/sh -c " | ||
| mkdir build && | ||
| cd build && | ||
| cmake .. -DBUILD_INDIGO=ON -DBUILD_INDIGO_WRAPPERS=OFF -DBUILD_INDIGO_UTILS=OFF -DBUILD_BINGO=OFF -DBUILD_BINGO_ELASTIC=OFF -DCMAKE_SYSTEM_PROCESSOR_LOWER=aarch64 && | ||
| cmake --build . --config Release --target all -- -j $(nproc) && | ||
| ctest --verbose -R dlopen | ||
| " | ||
| - name: Build macOS | ||
| if: ${{ startsWith(matrix.os, 'macos') }} | ||
| run: | | ||
| mkdir build | ||
| cd build | ||
| cmake .. -DBUILD_INDIGO=ON -DBUILD_INDIGO_WRAPPERS=OFF -DBUILD_INDIGO_UTILS=OFF -DBUILD_BINGO=OFF -DBUILD_BINGO_ELASTIC=OFF -DCMAKE_SYSTEM_PROCESSOR_LOWER=aarch64 -DCMAKE_OSX_ARCHITECTURES=arm64 | ||
| cmake --build . --config Release --target all -- -j $(sysctl -n hw.logicalcpu) | ||
| # ctest --verbose # NOTE: We can't run tests until we have native ARM64 node | ||
| - name: Upload artifacts | ||
| uses: actions/upload-artifact@v4 | ||
| with: | ||
| name: indigo-libs-${{ fromJSON(env.OS_NAME_MAPPING_JSON)[matrix.os] }}-aarch64 | ||
| path: dist | ||
| build_indigo_wrappers: | ||
| strategy: | ||
| fail-fast: false | ||
| matrix: | ||
| wrapper: [ python, java, dotnet ] | ||
| runs-on: ubuntu-latest | ||
| needs: [ build_indigo_libs_x86_64, build_indigo_libs_aarch64, build_indigo_libs_i386 ] | ||
| container: epmlsop/indigo-tester:latest | ||
| steps: | ||
| - name: Checkout | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| lfs: false | ||
| fetch-depth: 500 | ||
| - name: Git fetch tags | ||
| run: | | ||
| git config --global --add safe.directory '*' | ||
| git fetch --tags -f | ||
| - name: Create folder for native libs | ||
| run: mkdir dist | ||
| - name: Download Linux native libs x86_64 | ||
| uses: actions/download-artifact@v4 | ||
| with: | ||
| name: indigo-libs-linux-x86_64 | ||
| path: dist/ | ||
| - name: Download Linux native libs aarch64 | ||
| uses: actions/download-artifact@v4 | ||
| with: | ||
| name: indigo-libs-linux-aarch64 | ||
| path: dist/ | ||
| - name: Download Windows native libs x86_64 | ||
| uses: actions/download-artifact@v4 | ||
| with: | ||
| name: indigo-libs-windows-x86_64 | ||
| path: dist/ | ||
| - name: Download Windows native libs i386 | ||
| uses: actions/download-artifact@v4 | ||
| with: | ||
| name: indigo-libs-windows-i386 | ||
| path: dist/ | ||
| - name: Download macOS native libs x86_64 | ||
| uses: actions/download-artifact@v4 | ||
| with: | ||
| name: indigo-libs-macos-x86_64 | ||
| path: dist/ | ||
| - name: Download macOS native libs aarch64 | ||
| uses: actions/download-artifact@v4 | ||
| with: | ||
| name: indigo-libs-macos-aarch64 | ||
| path: dist/ | ||
| - name: Install Python test dependencies | ||
| run: python3 -m pip install -r api/python/requirements_dev.txt --break-system-packages | ||
| - name: Build wrappers | ||
| run: | | ||
| mkdir build | ||
| cd build | ||
| cmake .. -DBUILD_INDIGO=OFF -DBUILD_INDIGO_UTILS=OFF -DBUILD_BINGO=OFF -DBUILD_BINGO_ELASTIC=OFF | ||
| cmake --build . --config Release --target indigo-${{ matrix.wrapper }} | ||
| - name: Upload native shared libs | ||
| uses: actions/upload-artifact@v4 | ||
| with: | ||
| name: indigo-native-shared-libs-${{ matrix.wrapper }} | ||
| path: | | ||
| dist/lib | ||
| - name: Upload Python wrappers | ||
| if: ${{ matrix.wrapper == 'python' }} | ||
| uses: actions/upload-artifact@v4 | ||
| with: | ||
| name: indigo-python | ||
| path: | | ||
| dist/*.whl | ||
| - name: Upload Java wrappers | ||
| if: ${{ matrix.wrapper == 'java' }} | ||
| uses: actions/upload-artifact@v4 | ||
| with: | ||
| name: indigo-java | ||
| path: dist/*.jar | ||
| - name: Upload .NET wrappers | ||
| if: ${{ matrix.wrapper == 'dotnet' }} | ||
| uses: actions/upload-artifact@v4 | ||
| with: | ||
| name: indigo-dotnet | ||
| path: dist/*.nupkg | ||
| merge_indigo_wrappers: | ||
| runs-on: ubuntu-latest | ||
| needs: build_indigo_wrappers | ||
| steps: | ||
| - name: Merge native shared libs | ||
| uses: actions/upload-artifact/merge@v4 | ||
| with: | ||
| name: indigo-native-shared-libs | ||
| pattern: indigo-native-shared-libs-* | ||
| build_bingo_postgres_linux_x86_64: | ||
| strategy: | ||
| fail-fast: false | ||
| matrix: | ||
| postgres_major_version: [ 13 ] | ||
| runs-on: ubuntu-latest | ||
| needs: [build_indigo_windows_mingw_x86_64, build_indigo_ketcher_cjk, build_bingo_oracle_linux_x86_64, build_bingo_oracle_windows_mingw_x86_64, build_bingo_oracle_windows_msvc_x86_64] | ||
| steps: | ||
| - name: Checkout | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| lfs: false | ||
| fetch-depth: 500 | ||
| - name: Set up Python | ||
| uses: actions/setup-python@v5 | ||
| with: | ||
| python-version: '3.12' | ||
| - name: Git fetch tags | ||
| run: | | ||
| git config --global --add safe.directory '*' | ||
| git fetch --tags -f | ||
| - name: Install postgres server headers and build bingo-postgres | ||
| uses: docker://epmlsop/buildpack-almalinux8:latest | ||
| with: | ||
| args: > | ||
| /bin/sh -c " | ||
| set -eux && | ||
| yum install -y https://download.postgresql.org/pub/repos/yum/reporpms/EL-8-x86_64/pgdg-redhat-repo-latest.noarch.rpm && | ||
| curl -OL https://download.postgresql.org/pub/repos/yum/keys/PGDG-RPM-GPG-KEY-RHEL && | ||
| rpm --import PGDG-RPM-GPG-KEY-RHEL && | ||
| yumdownloader -y postgresql${{ matrix.postgres_major_version }}-devel && | ||
| rpm -i --nodeps postgresql${{ matrix.postgres_major_version }}*.rpm && | ||
| ls -alh /usr && | ||
| export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:/opt/rh/httpd24/root/usr/lib64 && | ||
| mkdir build && | ||
| cd build && | ||
| cmake .. -DBUILD_BINGO_POSTGRES=ON -DBUILD_BINGO_SQLSERVER=OFF -DBUILD_BINGO_ORACLE=OFF -DBUILD_INDIGO=OFF -DBUILD_INDIGO_WRAPPERS=OFF -DBUILD_INDIGO_UTILS=OFF -DBUILD_BINGO_ELASTIC=OFF -DCMAKE_PREFIX_PATH=/usr/pgsql-${{ matrix.postgres_major_version }} && | ||
| cmake --build . --config Release --target package-bingo-postgres -- -j $(nproc) | ||
| " | ||
| - name: Upload artifacts | ||
| uses: actions/upload-artifact@v4 | ||
| with: | ||
| name: bingo-postgres-${{ matrix.postgres_major_version }}-linux-x86_64 | ||
| path: dist/bingo-postgres*.tgz | ||
| - name: Build Docker image | ||
| run: | | ||
| docker build --tag epmlsop/bingo-postgres:${{ matrix.postgres_major_version }}-latest -f bingo/postgres/Dockerfile --build-arg BINGO_PG_VERSION=${{ matrix.postgres_major_version }} . | ||
| - name: Start Docker container | ||
| run: | | ||
| docker run --rm -d -p 5432:5432 -e "POSTGRES_PASSWORD=password" -v /home:/home epmlsop/bingo-postgres:${{ matrix.postgres_major_version }}-latest | ||
| - name: Install dev dependencies | ||
| run: | | ||
| pip install -r bingo/tests/requirements.txt --break-system-packages | ||
| - name: Run Bingo tests | ||
| run: | | ||
| export PYTHONPATH=${{ github.workspace }}/bingo/bingo-elastic/python | ||
| pytest -s --tb=no --db postgres --junit-xml=junit_report.xml | ||
| cat /tmp/indigo.log | ||
| working-directory: bingo/tests | ||
| - name: Login to DockerHub | ||
| if: startsWith(github.ref, 'refs/tags/indigo-') | ||
| uses: docker/login-action@v1 | ||
| with: | ||
| username: ${{ secrets.DOCKERHUB_USERNAME }} | ||
| password: ${{ secrets.DOCKERHUB_TOKEN }} | ||
| - name: Publish Docker images | ||
| if: startsWith(github.ref, 'refs/tags/indigo-') | ||
| run: docker push epmlsop/bingo-postgres:${{ matrix.postgres_major_version }}-latest | ||
| - name: Publish Test Report | ||
| if: always() | ||
| uses: mikepenz/action-junit-report@v4 | ||
| with: | ||
| report_paths: 'bingo/tests/junit_report.xml' | ||
| github_token: ${{ secrets.GITHUB_TOKEN }} | ||
| check_name: "bingo_postgres_${{ matrix.postgres_major_version }}_test_report" | ||
| build_bingo_postgres_windows_msvc_x86_64: | ||
| strategy: | ||
| fail-fast: false | ||
| matrix: | ||
| postgres_major_version: [ "13", "14", "15", "16" ] | ||
| runs-on: windows-latest | ||
| needs: [build_indigo_windows_mingw_x86_64, build_indigo_ketcher_cjk, build_bingo_oracle_linux_x86_64, build_bingo_oracle_windows_mingw_x86_64, build_bingo_oracle_windows_msvc_x86_64] | ||
| steps: | ||
| - name: Checkout | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| lfs: false | ||
| fetch-depth: 500 | ||
| - name: Git fetch tags | ||
| run: | | ||
| git config --global --add safe.directory '*' | ||
| git fetch --tags -f | ||
| - name: Setup Postgres | ||
| run: | | ||
| $pg_version = switch(${{ matrix.postgres_major_version }}) { "17" { "17.5" } "16" { "16.9" } "15" { "15.13" } "14" { "14.18" } "13" { "13.21" } } | ||
| curl -O https://get.enterprisedb.com/postgresql/postgresql-${pg_version}-1-windows-x64-binaries.zip | ||
| Expand-Archive postgresql-${pg_version}-1-windows-x64-binaries.zip | ||
| mv postgresql-${pg_version}-1-windows-x64-binaries/pgsql pgsql | ||
| cp bingo/postgres/patches/generic-msvc.h pgsql/include/server/port/atomics/generic-msvc.h | ||
| - name: Build bingo-postgres | ||
| run: | | ||
| mkdir build | ||
| cd build | ||
| cmake .. -DBUILD_BINGO_POSTGRES=ON -DBUILD_BINGO_SQLSERVER=OFF -DBUILD_BINGO_ORACLE=OFF -DBUILD_INDIGO=OFF -DBUILD_INDIGO_WRAPPERS=OFF -DBUILD_INDIGO_UTILS=OFF -DBUILD_BINGO_ELASTIC=OFF -DPostgreSQL_ROOT="$(resolve-path $pwd/../pgsql)" | ||
| cmake --build . --config Release --target package-bingo-postgres | ||
| - name: Upload artifacts | ||
| uses: actions/upload-artifact@v4 | ||
| with: | ||
| name: bingo-postgres-${{ matrix.postgres_major_version }}-windows-x86_64 | ||
| path: dist/bingo-postgres*.zip | ||
| build_bingo_postgres_macos_x86_64: | ||
| strategy: | ||
| fail-fast: false | ||
| matrix: | ||
| postgres_major_version: [ 13, 14, 15, 16, 17 ] | ||
| runs-on: macos-13 | ||
| needs: [build_indigo_windows_mingw_x86_64, build_indigo_ketcher_cjk, build_bingo_oracle_linux_x86_64, build_bingo_oracle_windows_mingw_x86_64, build_bingo_oracle_windows_msvc_x86_64] | ||
| steps: | ||
| - name: Checkout | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| lfs: false | ||
| fetch-depth: 500 | ||
| - name: Git fetch tags | ||
| run: | | ||
| git config --global --add safe.directory '*' | ||
| git fetch --tags -f | ||
| - name: Setup Postgres | ||
| run: | | ||
| case ${{ matrix.postgres_major_version }} in 17) pg_version=17.5;; 16) pg_version=16.9;; 15) pg_version=15.13;; 14) pg_version=14.18;; 13) pg_version=13.21;; esac; | ||
| curl -O https://get.enterprisedb.com/postgresql/postgresql-${pg_version}-1-osx-binaries.zip | ||
| unzip postgresql-${pg_version}-1-osx-binaries.zip | ||
| mv pgsql/include/zlib.h pgsql/include/zlib.h.bck | ||
| - name: Build bingo-postgres | ||
| run: | | ||
| mkdir build | ||
| cd build | ||
| cmake .. -DBUILD_BINGO_POSTGRES=ON -DBUILD_BINGO_SQLSERVER=OFF -DBUILD_BINGO_ORACLE=OFF -DBUILD_INDIGO=OFF -DBUILD_INDIGO_WRAPPERS=OFF -DBUILD_INDIGO_UTILS=OFF -DBUILD_BINGO_ELASTIC=OFF -DPostgreSQL_ROOT="$(dirname $PWD)/pgsql" -DPostgreSQL_ADDITIONAL_VERSIONS=${{ matrix.postgres_major_version }} | ||
| cmake --build . --config Release --target package-bingo-postgres | ||
| - name: Upload artifacts | ||
| uses: actions/upload-artifact@v4 | ||
| with: | ||
| name: bingo-postgres-${{ matrix.postgres_major_version }}-macos-x86_64 | ||
| path: dist/bingo-postgres*.tgz | ||
| build_bingo_sqlserver_windows_msvc_x86_64: | ||
| strategy: | ||
| fail-fast: false | ||
| matrix: | ||
| os: [ windows-latest ] | ||
| runs-on: ${{ matrix.os }} | ||
| needs: [build_bingo_postgres_linux_x86_64, build_bingo_postgres_windows_msvc_x86_64, build_bingo_postgres_macos_x86_64] | ||
| steps: | ||
| - name: Checkout | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| lfs: false | ||
| fetch-depth: 500 | ||
| - name: Git fetch tags | ||
| run: | | ||
| git config --global --add safe.directory '*' | ||
| git fetch --tags -f | ||
| - name: Build | ||
| run: | | ||
| mkdir build | ||
| cd build | ||
| cmake .. -DBUILD_BINGO_SQLSERVER=ON -DBUILD_BINGO_POSTGRES=OFF -DBUILD_BINGO_ORACLE=OFF -DBUILD_INDIGO=OFF -DBUILD_INDIGO_WRAPPERS=OFF -DBUILD_INDIGO_UTILS=OFF -DBUILD_BINGO_ELASTIC=OFF | ||
| cmake --build . --config Release --target package-bingo-sqlserver | ||
| - name: Upload artifacts | ||
| uses: actions/upload-artifact@v4 | ||
| with: | ||
| name: bingo-sqlserver-${{ matrix.os }}-x86_64 | ||
| path: dist/bingo-sqlserver*.zip | ||
| publish_indigo_to_pypi: | ||
| if: startsWith(github.ref, 'refs/tags/indigo-') | ||
| runs-on: ubuntu-latest | ||
| needs: [test_indigo_python_x86_64, test_indigo_java_x86_64, test_indigo_dotnet_x86_64, test_indigo_python_i386, test_indigo_java_i386, test_indigo_dotnet_i386, test_indigo_python_aarch64, test_indigo_java_aarch64, merge_bingo_elastic_python_linux_x86_64, test_bingo_elastic_java_linux_x86_64, build_indigo_ketcher] | ||
| container: epmlsop/indigo-tester:latest | ||
| steps: | ||
| - name: Checkout | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| lfs: false | ||
| fetch-depth: 500 | ||
| - name: Git fetch tags | ||
| run: | | ||
| git config --global --add safe.directory '*' | ||
| git fetch --tags -f | ||
| - name: Create folder for native libs | ||
| run: mkdir -p dist/lib | ||
| - name: Download native shared libraries | ||
| uses: actions/download-artifact@v4 | ||
| with: | ||
| name: indigo-native-shared-libs | ||
| path: dist/lib | ||
| - name: Download Python wheels | ||
| uses: actions/download-artifact@v4 | ||
| with: | ||
| name: indigo-python | ||
| path: dist/ | ||
| - name: Download bingo-elastic-python | ||
| uses: actions/download-artifact@v4 | ||
| with: | ||
| name: bingo-elastic-python | ||
| path: dist/ | ||
| - name: Publish Python wheels to PyPI | ||
| env: | ||
| PYPI_TOKEN: ${{ secrets.PYPI_TOKEN }} | ||
| run: | | ||
| twine upload -u __token__ -p ${PYPI_TOKEN} --skip-existing dist/*.whl | ||
| publish_indigo_to_nuget: | ||
| if: startsWith(github.ref, 'refs/tags/indigo-') | ||
| runs-on: ubuntu-latest | ||
| needs: [test_indigo_python_x86_64, test_indigo_java_x86_64, test_indigo_dotnet_x86_64, test_indigo_python_i386, test_indigo_java_i386, test_indigo_dotnet_i386, test_indigo_python_aarch64, test_indigo_java_aarch64, merge_bingo_elastic_python_linux_x86_64, test_bingo_elastic_java_linux_x86_64, build_indigo_ketcher] | ||
| container: epmlsop/indigo-tester:latest | ||
| steps: | ||
| - name: Checkout | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| lfs: false | ||
| fetch-depth: 500 | ||
| - name: Git fetch tags | ||
| run: | | ||
| git config --global --add safe.directory '*' | ||
| git fetch --tags -f | ||
| - name: Create folder for native libs | ||
| run: mkdir -p dist/lib | ||
| - name: Download native shared libraries | ||
| uses: actions/download-artifact@v4 | ||
| with: | ||
| name: indigo-native-shared-libs | ||
| path: dist/lib | ||
| - name: Download .NET nupkg | ||
| uses: actions/download-artifact@v4 | ||
| with: | ||
| name: indigo-dotnet | ||
| path: dist/ | ||
| - name: Publish .NET nupkg to Nuget | ||
| env: | ||
| NUGET_API_KEY: ${{ secrets.NUGET_API_KEY }} | ||
| run: dotnet nuget push dist/*.nupkg --api-key ${NUGET_API_KEY} --source https://api.nuget.org/v3/index.json --skip-duplicate | ||
| publish_indigo_to_npm: | ||
| if: startsWith(github.ref, 'refs/tags/indigo-') | ||
| runs-on: ubuntu-latest | ||
| needs: [test_indigo_python_x86_64, test_indigo_java_x86_64, test_indigo_dotnet_x86_64, test_indigo_python_i386, test_indigo_java_i386, test_indigo_dotnet_i386, test_indigo_python_aarch64, test_indigo_java_aarch64, merge_bingo_elastic_python_linux_x86_64, test_bingo_elastic_java_linux_x86_64, build_indigo_ketcher] | ||
| container: epmlsop/indigo-tester:latest | ||
| steps: | ||
| - name: Checkout | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| lfs: false | ||
| fetch-depth: 500 | ||
| - name: Git fetch tags | ||
| run: | | ||
| git config --global --add safe.directory '*' | ||
| git fetch --tags -f | ||
| - name: Create folder for native libs | ||
| run: mkdir -p dist/lib | ||
| - name: Download native shared libraries | ||
| uses: actions/download-artifact@v4 | ||
| with: | ||
| name: indigo-native-shared-libs | ||
| path: dist/lib | ||
| - name: Download indigo-ketcher NPM package | ||
| uses: actions/download-artifact@v4 | ||
| with: | ||
| name: indigo-ketcher | ||
| path: dist/ | ||
| - name: Publish indigo-ketcher to NPM | ||
| env: | ||
| NPM_TOKEN: ${{ secrets.NPM_TOKEN }} | ||
| NPM_EMAIL: ${{ secrets.NPM_EMAIL }} | ||
| run: | | ||
| echo //registry.npmjs.org/:_authToken=${NPM_TOKEN} >> ~/.npmrc | ||
| echo email=${NPM_EMAIL} >> ~/.npmrc | ||
| echo always-auth=true >> ~/.npmrc | ||
| bash .ci/publish_npm.sh | ||
| publish_indigo_to_maven: | ||
| if: startsWith(github.ref, 'refs/tags/indigo-') | ||
| runs-on: ubuntu-latest | ||
| needs: [test_indigo_python_x86_64, test_indigo_java_x86_64, test_indigo_dotnet_x86_64, test_indigo_python_i386, test_indigo_java_i386, test_indigo_dotnet_i386, test_indigo_python_aarch64, test_indigo_java_aarch64, merge_bingo_elastic_python_linux_x86_64, test_bingo_elastic_java_linux_x86_64, build_indigo_ketcher] | ||
| container: epmlsop/indigo-tester:latest | ||
| steps: | ||
| - name: Checkout | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| lfs: false | ||
| fetch-depth: 500 | ||
| - name: Git fetch tags | ||
| run: | | ||
| git config --global --add safe.directory '*' | ||
| git fetch --tags -f | ||
| - name: Create folder for native libs | ||
| run: mkdir -p dist/lib | ||
| - name: Download native shared libraries | ||
| uses: actions/download-artifact@v4 | ||
| with: | ||
| name: indigo-native-shared-libs | ||
| path: dist/lib | ||
| - name: Publish Java jars to Maven Central | ||
| env: | ||
| MAVEN_USER: ${{ secrets.MAVEN_USER }} | ||
| MAVEN_PASSWORD: ${{ secrets.MAVEN_PASSWORD }} | ||
| GPG_PRIVATE_KEY: ${{ secrets.MK_GPG_PRIVATE_KEY }} | ||
| GPG_PASSPHRASE: ${{ secrets.MK_GPG_PASSPHRASE }} | ||
| run: | | ||
| pwd | ||
| set -eux | ||
| apt install -y gnupg | ||
| mkdir /root/.m2 | ||
| echo ${GPG_PRIVATE_KEY} > gpg.key | ||
| gpg --batch --import gpg.key | ||
| rm gpg.key | ||
| cd api/java | ||
| sed -e "s/MAVEN_USER/${MAVEN_USER}/" settings-template.xml | sed -e "s/MAVEN_PASSWORD/${MAVEN_PASSWORD}/" > /root/.m2/settings.xml | ||
| ./mvnw -e deploy -P sign-artifacts -Dossrh.user=${MAVEN_USER} -Dossrh.password=${MAVEN_PASSWORD} -Dgpg.passphrase=${GPG_PASSPHRASE} | ||
| cd ${GITHUB_WORKSPACE}/bingo/bingo-elastic/java/ | ||
| ${GITHUB_WORKSPACE}/api/java/mvnw -DskipTests -Dmaven.test.skip=true -e deploy -P sign-artifacts -Dossrh.user=${MAVEN_USER} -Dossrh.password=${MAVEN_PASSWORD} -Dgpg.passphrase=${GPG_PASSPHRASE} | ||
| build_test_publish_indigo_service_old: | ||
| timeout-minutes: 60 | ||
| runs-on: ubuntu-latest | ||
| needs: [build_bingo_postgres_linux_x86_64, build_bingo_postgres_windows_msvc_x86_64, build_bingo_postgres_macos_x86_64] | ||
| steps: | ||
| - name: Checkout | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| lfs: false | ||
| fetch-depth: 500 | ||
| - name: Git fetch tags | ||
| run: | | ||
| git config --global --add safe.directory '*' | ||
| git fetch --tags -f | ||
| - name: Download wrappers | ||
| uses: actions/download-artifact@v4 | ||
| with: | ||
| name: indigo-python | ||
| path: utils/indigo-service/backend/lib/ | ||
| - name: Build | ||
| run: docker build -f ./utils/indigo-service/backend/Dockerfile -t epmlsop/indigo-service:latest ./utils/indigo-service/backend | ||
| - name: Test Imago & Indigo | ||
| run: | | ||
| docker run --rm=true -d -p 8080:80 --name=indigo_service epmlsop/indigo-service:latest | ||
| sleep 10 | ||
| docker logs indigo_service | ||
| docker ps | ||
| export INDIGO_SERVICE_URL=http://localhost:8080/v2 | ||
| python3 utils/indigo-service/backend/service/tests/api/imago_test.py | ||
| python3 utils/indigo-service/backend/service/tests/api/indigo_test.py | ||
| docker logs indigo_service | ||
| docker stop indigo_service | ||
| # TODO: add indigo tests | ||
| # - name: Test | ||
| # run: | | ||
| # container_id=$(docker run --detach -it --rm -p 12345:80 epmlsop/indigo-service:latest) | ||
| # echo ${container_id} | ||
| # docker logs ${container_id} | ||
| # docker ps | ||
| # curl http://localhost:12345/v2/indigo/info | ||
| # docker logs ${container_id} | ||
| # docker stop ${container_id} | ||
| - name: Login to DockerHub | ||
| if: startsWith(github.ref, 'refs/tags/indigo-') | ||
| uses: docker/login-action@v1 | ||
| with: | ||
| username: ${{ secrets.DOCKERHUB_USERNAME }} | ||
| password: ${{ secrets.DOCKERHUB_TOKEN }} | ||
| - name: Publish release | ||
| if: startsWith(github.ref, 'refs/tags/indigo-') | ||
| run: | | ||
| export tag=${{ github.ref }} | ||
| export clean_tag=${tag/refs\/tags\/indigo-/} | ||
| docker tag epmlsop/indigo-service:latest epmlsop/indigo-service:${clean_tag} | ||
| docker push epmlsop/indigo-service:${clean_tag} | ||
| docker push epmlsop/indigo-service:latest | ||
| build_test_publish_indigo_service_new: | ||
| timeout-minutes: 60 | ||
| runs-on: ubuntu-latest | ||
| needs: [build_bingo_postgres_linux_x86_64, build_bingo_postgres_windows_msvc_x86_64, build_bingo_postgres_macos_x86_64] | ||
| steps: | ||
| - name: Checkout | ||
| uses: actions/checkout@v4 | ||
| with: | ||
| lfs: false | ||
| fetch-depth: 500 | ||
| - name: Git fetch tags | ||
| run: | | ||
| git config --global --add safe.directory '*' | ||
| git fetch --tags -f | ||
| - name: Download wrappers | ||
| uses: actions/download-artifact@v4 | ||
| with: | ||
| name: indigo-python | ||
| path: api/http/ | ||
| - name: Build | ||
| run: docker build -f ./api/http/Dockerfile -t epmlsop/indigo-service:enhanced-latest ./api/http | ||
| - name: Login to DockerHub | ||
| if: startsWith(github.ref, 'refs/tags/indigo-') | ||
| uses: docker/login-action@v1 | ||
| with: | ||
| username: ${{ secrets.DOCKERHUB_USERNAME }} | ||
| password: ${{ secrets.DOCKERHUB_TOKEN }} | ||
| - name: Publish release | ||
| if: startsWith(github.ref, 'refs/tags/indigo-') | ||
| run: | | ||
| export tag=${{ github.ref }} | ||
| export clean_tag=${tag/refs\/tags\/indigo-/} | ||
| docker tag epmlsop/indigo-service:enhanced-latest epmlsop/indigo-service:enhanced-${clean_tag} | ||
| docker push epmlsop/indigo-service:enhanced-${clean_tag} | ||
| docker push epmlsop/indigo-service:enhanced-latest | ||
