starting build "d21c5090-e43a-4e2a-8033-e7c72197a663"

FETCHSOURCE
hint: Using 'master' as the name for the initial branch. This default branch name
hint: is subject to change. To configure the initial branch name to use in all
hint: of your new repositories, which will suppress this warning, call:
hint:
hint: 	git config --global init.defaultBranch <name>
hint:
hint: Names commonly chosen instead of 'master' are 'main', 'trunk' and
hint: 'development'. The just-created branch can be renamed via this command:
hint:
hint: 	git branch -m <name>
Initialized empty Git repository in /workspace/.git/
From https://github.com/google/fhir-data-pipes
 * branch            6e4653dba1912488468b840231b5ddd00410db3f -> FETCH_HEAD
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HEAD is now at 6e4653d Bump org.apache.parquet:parquet-avro from 1.13.1 to 1.15.2
GitCommit:
6e4653dba1912488468b840231b5ddd00410db3f
BUILD
Starting Step #1 - "Launch Sink Server Search"
Starting Step #4 - "Compile Bunsen and Pipeline"
Starting Step #0 - "Launch HAPI Source Server"
Starting Step #2 - "Launch Sink Server JDBC"
Starting Step #5 - "Build Uploader Image"
Starting Step #7 - "Build E2E Image"
Step #4 - "Compile Bunsen and Pipeline": Pulling image: maven:3.8.5-openjdk-17
Step #0 - "Launch HAPI Source Server": Pulling image: docker/compose
Step #2 - "Launch Sink Server JDBC": Pulling image: docker/compose
Step #1 - "Launch Sink Server Search": Pulling image: docker/compose
Step #5 - "Build Uploader Image": Already have image (with digest): gcr.io/cloud-builders/docker
Step #7 - "Build E2E Image": Already have image (with digest): gcr.io/cloud-builders/docker
Step #2 - "Launch Sink Server JDBC": Using default tag: latest
Step #1 - "Launch Sink Server Search": Using default tag: latest
Step #0 - "Launch HAPI Source Server": Using default tag: latest
Step #5 - "Build Uploader Image": Sending build context to Docker daemon  1.466MB

Step #5 - "Build Uploader Image": Step 1/10 : FROM python:3.7-slim
Step #7 - "Build E2E Image": Sending build context to Docker daemon   65.6MB

Step #7 - "Build E2E Image": Step 1/14 : FROM maven:3.8.7-eclipse-temurin-17-focal
Step #1 - "Launch Sink Server Search": latest: Pulling from docker/compose
Step #1 - "Launch Sink Server Search": aad63a933944: Pulling fs layer
Step #1 - "Launch Sink Server Search": b396cd7cbac4: Pulling fs layer
Step #1 - "Launch Sink Server Search": 0426ec0ed60a: Pulling fs layer
Step #1 - "Launch Sink Server Search": 9ac2a98ece5b: Pulling fs layer
Step #1 - "Launch Sink Server Search": 9ac2a98ece5b: Waiting
Step #2 - "Launch Sink Server JDBC": latest: Pulling from docker/compose
Step #2 - "Launch Sink Server JDBC": aad63a933944: Pulling fs layer
Step #2 - "Launch Sink Server JDBC": b396cd7cbac4: Pulling fs layer
Step #2 - "Launch Sink Server JDBC": 0426ec0ed60a: Pulling fs layer
Step #2 - "Launch Sink Server JDBC": 9ac2a98ece5b: Pulling fs layer
Step #2 - "Launch Sink Server JDBC": 9ac2a98ece5b: Waiting
Step #1 - "Launch Sink Server Search": b396cd7cbac4: Verifying Checksum
Step #1 - "Launch Sink Server Search": b396cd7cbac4: Download complete
Step #2 - "Launch Sink Server JDBC": b396cd7cbac4: Verifying Checksum
Step #2 - "Launch Sink Server JDBC": b396cd7cbac4: Download complete
Step #4 - "Compile Bunsen and Pipeline": 3.8.5-openjdk-17: Pulling from library/maven
Step #0 - "Launch HAPI Source Server": latest: Pulling from docker/compose
Step #0 - "Launch HAPI Source Server": aad63a933944: Pulling fs layer
Step #0 - "Launch HAPI Source Server": b396cd7cbac4: Pulling fs layer
Step #0 - "Launch HAPI Source Server": 0426ec0ed60a: Pulling fs layer
Step #0 - "Launch HAPI Source Server": 9ac2a98ece5b: Pulling fs layer
Step #0 - "Launch HAPI Source Server": 9ac2a98ece5b: Waiting
Step #0 - "Launch HAPI Source Server": b396cd7cbac4: Download complete
Step #2 - "Launch Sink Server JDBC": aad63a933944: Download complete
Step #0 - "Launch HAPI Source Server": aad63a933944: Download complete
Step #1 - "Launch Sink Server Search": aad63a933944: Download complete
Step #4 - "Compile Bunsen and Pipeline": 38a980f2cc8a: Pulling fs layer
Step #4 - "Compile Bunsen and Pipeline": de849f1cfbe6: Pulling fs layer
Step #4 - "Compile Bunsen and Pipeline": a7203ca35e75: Pulling fs layer
Step #4 - "Compile Bunsen and Pipeline": 3337662e6dc9: Pulling fs layer
Step #4 - "Compile Bunsen and Pipeline": 81485058ab89: Pulling fs layer
Step #4 - "Compile Bunsen and Pipeline": b548970362bb: Pulling fs layer
Step #4 - "Compile Bunsen and Pipeline": dbd02ad382f5: Pulling fs layer
Step #4 - "Compile Bunsen and Pipeline": de849f1cfbe6: Waiting
Step #4 - "Compile Bunsen and Pipeline": 3337662e6dc9: Waiting
Step #4 - "Compile Bunsen and Pipeline": a7203ca35e75: Waiting
Step #4 - "Compile Bunsen and Pipeline": b548970362bb: Waiting
Step #4 - "Compile Bunsen and Pipeline": dbd02ad382f5: Waiting
Step #4 - "Compile Bunsen and Pipeline": 81485058ab89: Waiting
Step #2 - "Launch Sink Server JDBC": aad63a933944: Pull complete
Step #0 - "Launch HAPI Source Server": aad63a933944: Pull complete
Step #1 - "Launch Sink Server Search": aad63a933944: Pull complete
Step #2 - "Launch Sink Server JDBC": b396cd7cbac4: Pull complete
Step #1 - "Launch Sink Server Search": b396cd7cbac4: Pull complete
Step #0 - "Launch HAPI Source Server": b396cd7cbac4: Pull complete
Step #1 - "Launch Sink Server Search": 0426ec0ed60a: Verifying Checksum
Step #1 - "Launch Sink Server Search": 0426ec0ed60a: Download complete
Step #0 - "Launch HAPI Source Server": 0426ec0ed60a: Verifying Checksum
Step #0 - "Launch HAPI Source Server": 0426ec0ed60a: Download complete
Step #2 - "Launch Sink Server JDBC": 0426ec0ed60a: Verifying Checksum
Step #2 - "Launch Sink Server JDBC": 0426ec0ed60a: Download complete
Step #1 - "Launch Sink Server Search": 9ac2a98ece5b: Verifying Checksum
Step #1 - "Launch Sink Server Search": 9ac2a98ece5b: Download complete
Step #2 - "Launch Sink Server JDBC": 9ac2a98ece5b: Verifying Checksum
Step #2 - "Launch Sink Server JDBC": 9ac2a98ece5b: Download complete
Step #0 - "Launch HAPI Source Server": 9ac2a98ece5b: Verifying Checksum
Step #0 - "Launch HAPI Source Server": 9ac2a98ece5b: Download complete
Step #7 - "Build E2E Image": 3.8.7-eclipse-temurin-17-focal: Pulling from library/maven
Step #4 - "Compile Bunsen and Pipeline": de849f1cfbe6: Verifying Checksum
Step #4 - "Compile Bunsen and Pipeline": de849f1cfbe6: Download complete
Step #4 - "Compile Bunsen and Pipeline": 38a980f2cc8a: Verifying Checksum
Step #4 - "Compile Bunsen and Pipeline": 38a980f2cc8a: Download complete
Step #7 - "Build E2E Image": 7608715873ec: Pulling fs layer
Step #7 - "Build E2E Image": 64a0b7566174: Pulling fs layer
Step #7 - "Build E2E Image": 414e25888ba9: Pulling fs layer
Step #7 - "Build E2E Image": fa1796814410: Pulling fs layer
Step #7 - "Build E2E Image": dc3ab4515b24: Pulling fs layer
Step #7 - "Build E2E Image": 495d1ae42cb9: Pulling fs layer
Step #7 - "Build E2E Image": 66b6d86e5b33: Pulling fs layer
Step #7 - "Build E2E Image": 90062ecd5dec: Pulling fs layer
Step #7 - "Build E2E Image": 414e25888ba9: Waiting
Step #7 - "Build E2E Image": fa1796814410: Waiting
Step #7 - "Build E2E Image": dc3ab4515b24: Waiting
Step #7 - "Build E2E Image": 7608715873ec: Waiting
Step #7 - "Build E2E Image": 90062ecd5dec: Waiting
Step #7 - "Build E2E Image": 66b6d86e5b33: Waiting
Step #7 - "Build E2E Image": 495d1ae42cb9: Waiting
Step #7 - "Build E2E Image": 64a0b7566174: Waiting
Step #1 - "Launch Sink Server Search": 0426ec0ed60a: Pull complete
Step #2 - "Launch Sink Server JDBC": 0426ec0ed60a: Pull complete
Step #0 - "Launch HAPI Source Server": 0426ec0ed60a: Pull complete
Step #5 - "Build Uploader Image": 3.7-slim: Pulling from library/python
Step #1 - "Launch Sink Server Search": 9ac2a98ece5b: Pull complete
Step #0 - "Launch HAPI Source Server": 9ac2a98ece5b: Pull complete
Step #2 - "Launch Sink Server JDBC": 9ac2a98ece5b: Pull complete
Step #1 - "Launch Sink Server Search": Digest: sha256:b60a020c0f68047b353a4a747f27f5e5ddb17116b7b018762edfb6f7a6439a82
Step #2 - "Launch Sink Server JDBC": Digest: sha256:b60a020c0f68047b353a4a747f27f5e5ddb17116b7b018762edfb6f7a6439a82
Step #0 - "Launch HAPI Source Server": Digest: sha256:b60a020c0f68047b353a4a747f27f5e5ddb17116b7b018762edfb6f7a6439a82
Step #1 - "Launch Sink Server Search": Status: Downloaded newer image for docker/compose:latest
Step #2 - "Launch Sink Server JDBC": Status: Downloaded newer image for docker/compose:latest
Step #0 - "Launch HAPI Source Server": Status: Downloaded newer image for docker/compose:latest
Step #1 - "Launch Sink Server Search": docker.io/docker/compose:latest
Step #2 - "Launch Sink Server JDBC": docker.io/docker/compose:latest
Step #0 - "Launch HAPI Source Server": docker.io/docker/compose:latest
Step #5 - "Build Uploader Image": a803e7c4b030: Pulling fs layer
Step #5 - "Build Uploader Image": bf3336e84c8e: Pulling fs layer
Step #5 - "Build Uploader Image": 8973eb85275f: Pulling fs layer
Step #5 - "Build Uploader Image": f9afc3cc0135: Pulling fs layer
Step #5 - "Build Uploader Image": 39312d8b4ab7: Pulling fs layer
Step #5 - "Build Uploader Image": a803e7c4b030: Waiting
Step #5 - "Build Uploader Image": bf3336e84c8e: Waiting
Step #5 - "Build Uploader Image": 8973eb85275f: Waiting
Step #5 - "Build Uploader Image": f9afc3cc0135: Waiting
Step #4 - "Compile Bunsen and Pipeline": 81485058ab89: Download complete
Step #4 - "Compile Bunsen and Pipeline": b548970362bb: Verifying Checksum
Step #4 - "Compile Bunsen and Pipeline": b548970362bb: Download complete
Step #4 - "Compile Bunsen and Pipeline": dbd02ad382f5: Download complete
Step #7 - "Build E2E Image": 7608715873ec: Verifying Checksum
Step #7 - "Build E2E Image": 7608715873ec: Download complete
Step #4 - "Compile Bunsen and Pipeline": a7203ca35e75: Verifying Checksum
Step #4 - "Compile Bunsen and Pipeline": a7203ca35e75: Download complete
Step #4 - "Compile Bunsen and Pipeline": 38a980f2cc8a: Pull complete
Step #4 - "Compile Bunsen and Pipeline": 3337662e6dc9: Verifying Checksum
Step #4 - "Compile Bunsen and Pipeline": 3337662e6dc9: Download complete
Step #7 - "Build E2E Image": 64a0b7566174: Verifying Checksum
Step #7 - "Build E2E Image": 64a0b7566174: Download complete
Step #7 - "Build E2E Image": fa1796814410: Verifying Checksum
Step #7 - "Build E2E Image": fa1796814410: Download complete
Step #7 - "Build E2E Image": 495d1ae42cb9: Verifying Checksum
Step #7 - "Build E2E Image": 495d1ae42cb9: Download complete
Step #7 - "Build E2E Image": dc3ab4515b24: Verifying Checksum
Step #7 - "Build E2E Image": dc3ab4515b24: Download complete
Step #4 - "Compile Bunsen and Pipeline": de849f1cfbe6: Pull complete
Step #7 - "Build E2E Image": 66b6d86e5b33: Download complete
Step #7 - "Build E2E Image": 7608715873ec: Pull complete
Step #7 - "Build E2E Image": 90062ecd5dec: Download complete
Step #5 - "Build Uploader Image": bf3336e84c8e: Verifying Checksum
Step #5 - "Build Uploader Image": bf3336e84c8e: Download complete
Step #5 - "Build Uploader Image": a803e7c4b030: Download complete
Step #5 - "Build Uploader Image": 8973eb85275f: Verifying Checksum
Step #5 - "Build Uploader Image": 8973eb85275f: Download complete
Step #5 - "Build Uploader Image": f9afc3cc0135: Verifying Checksum
Step #5 - "Build Uploader Image": f9afc3cc0135: Download complete
Step #5 - "Build Uploader Image": 39312d8b4ab7: Verifying Checksum
Step #5 - "Build Uploader Image": 39312d8b4ab7: Download complete
Step #7 - "Build E2E Image": 414e25888ba9: Verifying Checksum
Step #7 - "Build E2E Image": 414e25888ba9: Download complete
Step #7 - "Build E2E Image": 64a0b7566174: Pull complete
Step #5 - "Build Uploader Image": a803e7c4b030: Pull complete
Step #5 - "Build Uploader Image": bf3336e84c8e: Pull complete
Step #4 - "Compile Bunsen and Pipeline": a7203ca35e75: Pull complete
Step #5 - "Build Uploader Image": 8973eb85275f: Pull complete
Step #7 - "Build E2E Image": 414e25888ba9: Pull complete
Step #5 - "Build Uploader Image": f9afc3cc0135: Pull complete
Step #7 - "Build E2E Image": fa1796814410: Pull complete
Step #5 - "Build Uploader Image": 39312d8b4ab7: Pull complete
Step #5 - "Build Uploader Image": Digest: sha256:b53f496ca43e5af6994f8e316cf03af31050bf7944e0e4a308ad86c001cf028b
Step #5 - "Build Uploader Image": Status: Downloaded newer image for python:3.7-slim
Step #5 - "Build Uploader Image":  ---> a255ffcb469f
Step #5 - "Build Uploader Image": Step 2/10 : WORKDIR /uploader
Step #5 - "Build Uploader Image":  ---> Running in 896b0d23ccd0
Step #5 - "Build Uploader Image": Removing intermediate container 896b0d23ccd0
Step #5 - "Build Uploader Image":  ---> 001537cbd151
Step #5 - "Build Uploader Image": Step 3/10 : COPY  ./ ./
Step #5 - "Build Uploader Image":  ---> 099453de0ec9
Step #5 - "Build Uploader Image": Step 4/10 : RUN pip install -r requirements.txt
Step #5 - "Build Uploader Image":  ---> Running in 1ee9908de24e
Step #7 - "Build E2E Image": dc3ab4515b24: Pull complete
Step #7 - "Build E2E Image": 495d1ae42cb9: Pull complete
Step #7 - "Build E2E Image": 66b6d86e5b33: Pull complete
Step #7 - "Build E2E Image": 90062ecd5dec: Pull complete
Step #7 - "Build E2E Image": Digest: sha256:ad4b34f02e52164df83182a2a05074b5288d6e6bcc2dfa0ce3d6fa43ec8b557f
Step #7 - "Build E2E Image": Status: Downloaded newer image for maven:3.8.7-eclipse-temurin-17-focal
Step #7 - "Build E2E Image":  ---> 896b49b4d0b7
Step #7 - "Build E2E Image": Step 2/14 : RUN apt-get update && apt-get install -y jq  python3.8 python3-pip
Step #4 - "Compile Bunsen and Pipeline": 3337662e6dc9: Pull complete
Step #7 - "Build E2E Image":  ---> Running in 5a023c8454d7
Step #4 - "Compile Bunsen and Pipeline": 81485058ab89: Pull complete
Step #4 - "Compile Bunsen and Pipeline": b548970362bb: Pull complete
Step #4 - "Compile Bunsen and Pipeline": dbd02ad382f5: Pull complete
Step #4 - "Compile Bunsen and Pipeline": Digest: sha256:3a9c30b3af6278a8ae0007d3a3bf00fff80ec3ed7ae4eb9bfa1772853101549b
Step #4 - "Compile Bunsen and Pipeline": Status: Downloaded newer image for maven:3.8.5-openjdk-17
Step #4 - "Compile Bunsen and Pipeline": docker.io/library/maven:3.8.5-openjdk-17
Step #1 - "Launch Sink Server Search": Creating volume "sink-server-search_hapi-data" with default driver
Step #7 - "Build E2E Image": Get:1 http://archive.ubuntu.com/ubuntu focal InRelease [265 kB]
Step #7 - "Build E2E Image": Get:2 http://security.ubuntu.com/ubuntu focal-security InRelease [128 kB]
Step #2 - "Launch Sink Server JDBC": Creating volume "sink-server-jdbc_hapi-data" with default driver
Step #7 - "Build E2E Image": Get:3 http://archive.ubuntu.com/ubuntu focal-updates InRelease [128 kB]
Step #7 - "Build E2E Image": Get:4 http://archive.ubuntu.com/ubuntu focal-backports InRelease [128 kB]
Step #7 - "Build E2E Image": Get:5 http://archive.ubuntu.com/ubuntu focal/universe amd64 Packages [11.3 MB]
Step #0 - "Launch HAPI Source Server": Creating network "hapi-compose_default" with the default driver
Step #7 - "Build E2E Image": Get:6 http://security.ubuntu.com/ubuntu focal-security/restricted amd64 Packages [4,801 kB]
Step #7 - "Build E2E Image": Get:7 http://archive.ubuntu.com/ubuntu focal/restricted amd64 Packages [33.4 kB]
Step #7 - "Build E2E Image": Get:8 http://archive.ubuntu.com/ubuntu focal/main amd64 Packages [1,275 kB]
Step #7 - "Build E2E Image": Get:9 http://archive.ubuntu.com/ubuntu focal/multiverse amd64 Packages [177 kB]
Step #7 - "Build E2E Image": Get:10 http://security.ubuntu.com/ubuntu focal-security/main amd64 Packages [4,432 kB]
Step #7 - "Build E2E Image": Get:11 http://archive.ubuntu.com/ubuntu focal-updates/universe amd64 Packages [1,599 kB]
Step #7 - "Build E2E Image": Get:12 http://security.ubuntu.com/ubuntu focal-security/multiverse amd64 Packages [33.1 kB]
Step #7 - "Build E2E Image": Get:13 http://security.ubuntu.com/ubuntu focal-security/universe amd64 Packages [1,308 kB]
Step #7 - "Build E2E Image": Get:14 http://archive.ubuntu.com/ubuntu focal-updates/restricted amd64 Packages [4,998 kB]
Step #7 - "Build E2E Image": Get:15 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 Packages [4,919 kB]
Step #7 - "Build E2E Image": Get:16 http://archive.ubuntu.com/ubuntu focal-updates/multiverse amd64 Packages [36.8 kB]
Step #0 - "Launch HAPI Source Server": Creating volume "hapi-compose_hapi-fhir-db" with default driver
Step #7 - "Build E2E Image": Get:17 http://archive.ubuntu.com/ubuntu focal-backports/main amd64 Packages [55.2 kB]
Step #7 - "Build E2E Image": Get:18 http://archive.ubuntu.com/ubuntu focal-backports/universe amd64 Packages [28.6 kB]
Step #1 - "Launch Sink Server Search": Pulling sink-server (hapiproject/hapi:latest)...
Step #2 - "Launch Sink Server JDBC": Pulling sink-server (hapiproject/hapi:latest)...
Step #0 - "Launch HAPI Source Server": Creating volume "hapi-compose_hapi-server" with default driver
Step #5 - "Build Uploader Image": Collecting google-auth
Step #5 - "Build Uploader Image":   Downloading google_auth-2.40.3-py2.py3-none-any.whl (216 kB)
Step #5 - "Build Uploader Image":      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 216.1/216.1 kB 5.6 MB/s eta 0:00:00
Step #5 - "Build Uploader Image": Collecting mock
Step #5 - "Build Uploader Image":   Downloading mock-5.2.0-py3-none-any.whl (31 kB)
Step #5 - "Build Uploader Image": Collecting requests
Step #5 - "Build Uploader Image":   Downloading requests-2.31.0-py3-none-any.whl (62 kB)
Step #5 - "Build Uploader Image":      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 62.6/62.6 kB 9.1 MB/s eta 0:00:00
Step #5 - "Build Uploader Image": Collecting rsa<5,>=3.1.4
Step #5 - "Build Uploader Image":   Downloading rsa-4.9.1-py3-none-any.whl (34 kB)
Step #5 - "Build Uploader Image": Collecting cachetools<6.0,>=2.0.0
Step #5 - "Build Uploader Image":   Downloading cachetools-5.5.2-py3-none-any.whl (10 kB)
Step #5 - "Build Uploader Image": Collecting pyasn1-modules>=0.2.1
Step #5 - "Build Uploader Image":   Downloading pyasn1_modules-0.3.0-py2.py3-none-any.whl (181 kB)
Step #5 - "Build Uploader Image":      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 181.3/181.3 kB 21.6 MB/s eta 0:00:00
Step #5 - "Build Uploader Image": Collecting certifi>=2017.4.17
Step #5 - "Build Uploader Image":   Downloading certifi-2025.7.14-py3-none-any.whl (162 kB)
Step #5 - "Build Uploader Image":      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 162.7/162.7 kB 21.1 MB/s eta 0:00:00
Step #4 - "Compile Bunsen and Pipeline": [INFO] Error stacktraces are turned on.
Step #4 - "Compile Bunsen and Pipeline": [INFO] Scanning for projects...
Step #0 - "Launch HAPI Source Server": Pulling db (postgres:)...
Step #5 - "Build Uploader Image": Collecting charset-normalizer<4,>=2
Step #5 - "Build Uploader Image":   Downloading charset_normalizer-3.4.2-cp37-cp37m-manylinux_2_17_x86_64.manylinux2014_x86_64.whl (141 kB)
Step #5 - "Build Uploader Image":      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 141.3/141.3 kB 18.8 MB/s eta 0:00:00
Step #1 - "Launch Sink Server Search": latest: Pulling from hapiproject/hapi
Step #5 - "Build Uploader Image": Collecting idna<4,>=2.5
Step #5 - "Build Uploader Image":   Downloading idna-3.10-py3-none-any.whl (70 kB)
Step #5 - "Build Uploader Image":      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 70.4/70.4 kB 10.0 MB/s eta 0:00:00
Step #2 - "Launch Sink Server JDBC": latest: Pulling from hapiproject/hapi
Step #5 - "Build Uploader Image": Collecting urllib3<3,>=1.21.1
Step #5 - "Build Uploader Image":   Downloading urllib3-2.0.7-py3-none-any.whl (124 kB)
Step #5 - "Build Uploader Image":      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 124.2/124.2 kB 14.5 MB/s eta 0:00:00
Step #5 - "Build Uploader Image": Collecting pyasn1<0.6.0,>=0.4.6
Step #5 - "Build Uploader Image":   Downloading pyasn1-0.5.1-py2.py3-none-any.whl (84 kB)
Step #5 - "Build Uploader Image":      ━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 84.9/84.9 kB 11.5 MB/s eta 0:00:00
Step #0 - "Launch HAPI Source Server": latest: Pulling from library/postgres
Step #5 - "Build Uploader Image": Installing collected packages: urllib3, pyasn1, mock, idna, charset-normalizer, certifi, cachetools, rsa, requests, pyasn1-modules, google-auth
Step #7 - "Build E2E Image": Fetched 35.7 MB in 3s (13.0 MB/s)
Step #4 - "Compile Bunsen and Pipeline": [INFO] ------------------------------------------------------------------------
Step #4 - "Compile Bunsen and Pipeline": [INFO] Reactor Build Order:
Step #4 - "Compile Bunsen and Pipeline": [INFO] 
Step #4 - "Compile Bunsen and Pipeline": [INFO] root                                                               [pom]
Step #4 - "Compile Bunsen and Pipeline": [INFO] Bunsen Parent                                                      [pom]
Step #4 - "Compile Bunsen and Pipeline": [INFO] Extension Structure Definitions                                    [jar]
Step #4 - "Compile Bunsen and Pipeline": [INFO] Bunsen Core                                                        [jar]
Step #4 - "Compile Bunsen and Pipeline": [INFO] Bunsen Core R4                                                     [jar]
Step #4 - "Compile Bunsen and Pipeline": [INFO] Bunsen Core Stu3                                                   [jar]
Step #4 - "Compile Bunsen and Pipeline": [INFO] Bunsen Avro                                                        [jar]
Step #4 - "Compile Bunsen and Pipeline": [INFO] FHIR Analytics                                                     [pom]
Step #4 - "Compile Bunsen and Pipeline": [INFO] common                                                             [jar]
Step #4 - "Compile Bunsen and Pipeline": [INFO] batch                                                              [jar]
Step #4 - "Compile Bunsen and Pipeline": [INFO] controller                                                         [jar]
Step #4 - "Compile Bunsen and Pipeline": [INFO] coverage                                                           [pom]
Step #4 - "Compile Bunsen and Pipeline": [INFO] 
Step #4 - "Compile Bunsen and Pipeline": [INFO] Using the MultiThreadedBuilder implementation with a thread count of 64
Step #4 - "Compile Bunsen and Pipeline": [INFO] 
Step #4 - "Compile Bunsen and Pipeline": [INFO] -------------------< com.google.fhir.analytics:root >-------------------
Step #4 - "Compile Bunsen and Pipeline": [INFO] Building root 0.2.7-SNAPSHOT                                      [1/12]
Step #4 - "Compile Bunsen and Pipeline": [INFO] --------------------------------[ pom ]---------------------------------
Step #5 - "Build Uploader Image": Successfully installed cachetools-5.5.2 certifi-2025.7.14 charset-normalizer-3.4.2 google-auth-2.40.3 idna-3.10 mock-5.2.0 pyasn1-0.5.1 pyasn1-modules-0.3.0 requests-2.31.0 rsa-4.9.1 urllib3-2.0.7
Step #5 - "Build Uploader Image": �[91mWARNING: Running pip as the 'root' user can result in broken permissions and conflicting behaviour with the system package manager. It is recommended to use a virtual environment instead: https://pip.pypa.io/warnings/venv
Step #4 - "Compile Bunsen and Pipeline": [INFO] 
Step #4 - "Compile Bunsen and Pipeline": [INFO] --- jacoco-maven-plugin:0.8.13:prepare-agent (default) @ root ---
Step #5 - "Build Uploader Image": �[0m�[91m
Step #5 - "Build Uploader Image": [notice] A new release of pip is available: 23.0.1 -> 24.0
Step #5 - "Build Uploader Image": [notice] To update, run: pip install --upgrade pip
Step #4 - "Compile Bunsen and Pipeline": [INFO] argLine set to -javaagent:/root/.m2/repository/org/jacoco/org.jacoco.agent/0.8.13/org.jacoco.agent-0.8.13-runtime.jar=destfile=/workspace/target/jacoco.exec
Step #4 - "Compile Bunsen and Pipeline": [INFO] 
Step #4 - "Compile Bunsen and Pipeline": [INFO] --- maven-install-plugin:2.4:install (default-install) @ root ---
Step #7 - "Build E2E Image": Reading package lists...
Step #4 - "Compile Bunsen and Pipeline": [INFO] Installing /workspace/pom.xml to /root/.m2/repository/com/google/fhir/analytics/root/0.2.7-SNAPSHOT/root-0.2.7-SNAPSHOT.pom
Step #4 - "Compile Bunsen and Pipeline": [INFO] 
Step #4 - "Compile Bunsen and Pipeline": [INFO] ------------------< com.cerner.bunsen:bunsen-parent >-------------------
Step #4 - "Compile Bunsen and Pipeline": [INFO] Building Bunsen Parent 0.5.14-SNAPSHOT                            [2/12]
Step #4 - "Compile Bunsen and Pipeline": [INFO] --------------------------------[ pom ]---------------------------------
Step #4 - "Compile Bunsen and Pipeline": [INFO] 
Step #4 - "Compile Bunsen and Pipeline": [INFO] ----------------< com.google.fhir.analytics:pipelines >-----------------
Step #4 - "Compile Bunsen and Pipeline": [INFO] Building FHIR Analytics 0.2.7-SNAPSHOT                            [3/12]
Step #4 - "Compile Bunsen and Pipeline": [INFO] --------------------------------[ pom ]---------------------------------
Step #5 - "Build Uploader Image": �[0mRemoving intermediate container 1ee9908de24e
Step #5 - "Build Uploader Image":  ---> 13fd7fc50870
Step #5 - "Build Uploader Image": Step 5/10 : ENV INPUT_DIR="./test_files"
Step #5 - "Build Uploader Image":  ---> Running in 3b79badf32c7
Step #5 - "Build Uploader Image": Removing intermediate container 3b79badf32c7
Step #5 - "Build Uploader Image":  ---> 757e0964bfcc
Step #5 - "Build Uploader Image": Step 6/10 : ENV CORES=""
Step #5 - "Build Uploader Image":  ---> Running in 5e27c9ed9e07
Step #5 - "Build Uploader Image": Removing intermediate container 5e27c9ed9e07
Step #5 - "Build Uploader Image":  ---> 57b6e6a3c196
Step #5 - "Build Uploader Image": Step 7/10 : ENV CONVERT=""
Step #5 - "Build Uploader Image":  ---> Running in e8c779437770
Step #5 - "Build Uploader Image": Removing intermediate container e8c779437770
Step #5 - "Build Uploader Image":  ---> bcbb3a30c1dc
Step #5 - "Build Uploader Image": Step 8/10 : ENV SINK_TYPE="HAPI"
Step #5 - "Build Uploader Image":  ---> Running in ad1ca43e502e
Step #4 - "Compile Bunsen and Pipeline": [INFO] 
Step #4 - "Compile Bunsen and Pipeline": [INFO] --- jacoco-maven-plugin:0.8.13:prepare-agent (default) @ bunsen-parent ---
Step #4 - "Compile Bunsen and Pipeline": [INFO] argLine set to -javaagent:/root/.m2/repository/org/jacoco/org.jacoco.agent/0.8.13/org.jacoco.agent-0.8.13-runtime.jar=destfile=/workspace/bunsen/target/jacoco.exec
Step #4 - "Compile Bunsen and Pipeline": [INFO] 
Step #4 - "Compile Bunsen and Pipeline": [INFO] --- maven-resources-plugin:3.3.1:resources (generate-resources) @ bunsen-parent ---
Step #4 - "Compile Bunsen and Pipeline": [INFO] 
Step #4 - "Compile Bunsen and Pipeline": [INFO] --- directory-maven-plugin:1.0:highest-basedir (directories) @ pipelines ---
Step #5 - "Build Uploader Image": Removing intermediate container ad1ca43e502e
Step #5 - "Build Uploader Image":  ---> b6ea9150ca95
Step #5 - "Build Uploader Image": Step 9/10 : ENV FHIR_ENDPOINT="http://localhost:8098/fhir"
Step #5 - "Build Uploader Image":  ---> Running in 32884bc205a7
Step #4 - "Compile Bunsen and Pipeline": [INFO] skip non existing resourceDirectory /workspace/bunsen/src/main/resources
Step #4 - "Compile Bunsen and Pipeline": [INFO] 
Step #4 - "Compile Bunsen and Pipeline": [INFO] --- spotless-maven-plugin:2.45.0:apply (default) @ bunsen-parent ---
Step #5 - "Build Uploader Image": Removing intermediate container 32884bc205a7
Step #5 - "Build Uploader Image":  ---> ffa1decd4ced
Step #5 - "Build Uploader Image": Step 10/10 : CMD cd /uploader; python main.py ${SINK_TYPE}     ${FHIR_ENDPOINT} --input_dir ${INPUT_DIR} ${CORES} ${CONVERT}
Step #7 - "Build E2E Image": Reading package lists...
Step #5 - "Build Uploader Image":  ---> Running in ab38203fb669
Step #7 - "Build E2E Image": Building dependency tree...
Step #7 - "Build E2E Image": Reading state information...
Step #5 - "Build Uploader Image": Removing intermediate container ab38203fb669
Step #5 - "Build Uploader Image":  ---> dbeda8a9a995
Step #5 - "Build Uploader Image": Successfully built dbeda8a9a995
Step #5 - "Build Uploader Image": Successfully tagged us-docker.pkg.dev/cloud-build-fhir/fhir-analytics/synthea-uploader:6e4653d
Step #7 - "Build E2E Image": The following additional packages will be installed:
Step #7 - "Build E2E Image":   build-essential cpp cpp-9 dirmngr dpkg-dev fakeroot file g++ g++-9 gcc
Step #7 - "Build E2E Image":   gcc-10-base gcc-9 gcc-9-base gnupg gnupg-l10n gnupg-utils gpg gpg-agent
Step #7 - "Build E2E Image":   gpg-wks-client gpg-wks-server gpgconf gpgsm gpgv libalgorithm-diff-perl
Step #7 - "Build E2E Image":   libalgorithm-diff-xs-perl libalgorithm-merge-perl libasan5 libassuan0
Step #7 - "Build E2E Image":   libatomic1 libc-dev-bin libc6 libc6-dev libcc1-0 libcrypt-dev libdpkg-perl
Step #7 - "Build E2E Image":   libexpat1 libexpat1-dev libfakeroot libfile-fcntllock-perl libgcc-9-dev
Step #7 - "Build E2E Image":   libgcc-s1 libgomp1 libisl22 libitm1 libjq1 libksba8 liblocale-gettext-perl
Step #7 - "Build E2E Image":   liblsan0 libmagic-mgc libmagic1 libmpc3 libmpdec2 libmpfr6 libnpth0 libonig5
Step #7 - "Build E2E Image":   libpython3-dev libpython3-stdlib libpython3.8 libpython3.8-dev
Step #7 - "Build E2E Image":   libpython3.8-minimal libpython3.8-stdlib libquadmath0 libreadline8
Step #7 - "Build E2E Image":   libstdc++-9-dev libstdc++6 libtsan0 libubsan1 linux-libc-dev make manpages
Step #7 - "Build E2E
...
[Logs truncated due to log size limitations. For full logs, see https://storage.cloud.google.com/cloud-build-gh-logs/log-d21c5090-e43a-4e2a-8033-e7c72197a663.txt.]
...
: > Content-Type: application/json
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": > Accept: */*
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": > 
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": < HTTP/1.1 200 
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": < Content-Type: text/plain;charset=UTF-8
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": < Content-Length: 7
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": < Date: Wed, 16 Jul 2025 17:06:21 GMT
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": < 
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": { [7 bytes data]
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": 
100     7  100     7    0     0     25      0 --:--:-- --:--:-- --:--:--    25
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": * Connection #0 to host pipeline-controller left intact
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": Note: Unnecessary use of -X or --request, GET is already inferred.
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver":   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver":                                  Dload  Upload   Total   Spent    Left  Speed
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": 
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0*   Trying 192.168.10.11:8080...
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": * Connected to pipeline-controller (192.168.10.11) port 8080 (#0)
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": > GET /status? HTTP/1.1
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": > Host: pipeline-controller:8080
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": > User-Agent: curl/7.88.1
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": > Content-Type: application/json
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": > Accept: */*
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": > 
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": < HTTP/1.1 200 
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": < Content-Type: application/json
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": < Transfer-Encoding: chunked
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": < Date: Wed, 16 Jul 2025 17:06:21 GMT
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": < 
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": { [68 bytes data]
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": 
100    62    0    62    0     0    797      0 --:--:-- --:--:-- --:--:--   805
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": * Connection #0 to host pipeline-controller left intact
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:21.420 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=12000
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:21.529 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=6900
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:21.536 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=15400
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:21.592 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=10300
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:21.619 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=13700
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:21.718 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=5200
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:21.735 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=8600
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:24.608 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=200
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:25.863 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=1900
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:26.002 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=3600
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": Note: Unnecessary use of -X or --request, GET is already inferred.
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver":   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver":                                  Dload  Upload   Total   Spent    Left  Speed
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": 
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0*   Trying 192.168.10.11:8080...
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": * Connected to pipeline-controller (192.168.10.11) port 8080 (#0)
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": > GET /status? HTTP/1.1
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": > Host: pipeline-controller:8080
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": > User-Agent: curl/7.88.1
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": > Content-Type: application/json
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": > Accept: */*
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": > 
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": < HTTP/1.1 200 
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": < Content-Type: application/json
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": < Transfer-Encoding: chunked
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": < Date: Wed, 16 Jul 2025 17:06:26 GMT
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": < 
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": { [68 bytes data]
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": 
100    62    0    62    0     0   9776      0 --:--:-- --:--:-- --:--:-- 10333
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": * Connection #0 to host pipeline-controller left intact
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:26.649 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=7000
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:26.704 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=12100
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:26.809 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=10400
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:26.897 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=13800
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:26.911 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=15500
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:26.999 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=5300
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:27.059 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=8700
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:29.252 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=300
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:30.985 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=2000
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:31.321 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=3700
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": Note: Unnecessary use of -X or --request, GET is already inferred.
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver":   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver":                                  Dload  Upload   Total   Spent    Left  Speed
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": 
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0*   Trying 192.168.10.11:8080...
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": * Connected to pipeline-controller (192.168.10.11) port 8080 (#0)
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": > GET /status? HTTP/1.1
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": > Host: pipeline-controller:8080
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": > User-Agent: curl/7.88.1
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": > Content-Type: application/json
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": > Accept: */*
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": > 
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": < HTTP/1.1 200 
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": < Content-Type: application/json
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": < Transfer-Encoding: chunked
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": < Date: Wed, 16 Jul 2025 17:06:31 GMT
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": < 
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": { [68 bytes data]
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": 
100    62    0    62    0     0   8918      0 --:--:-- --:--:-- --:--:-- 10333
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": * Connection #0 to host pipeline-controller left intact
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:31.585 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=7100
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:31.638 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=12200
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:31.736 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=10500
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:31.759 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=13900
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:31.787 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=15600
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:31.923 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=5400
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:31.983 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=8800
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:34.680 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=400
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": Note: Unnecessary use of -X or --request, GET is already inferred.
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver":   % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver":                                  Dload  Upload   Total   Spent    Left  Speed
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": 
  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0*   Trying 192.168.10.11:8080...
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": * Connected to pipeline-controller (192.168.10.11) port 8080 (#0)
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": > GET /status? HTTP/1.1
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": > Host: pipeline-controller:8080
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": > User-Agent: curl/7.88.1
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": > Content-Type: application/json
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": > Accept: */*
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": > 
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": < HTTP/1.1 500 
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": < Content-Type: application/json
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": < Transfer-Encoding: chunked
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": < Date: Wed, 16 Jul 2025 17:06:36 GMT
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": < Connection: close
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": < 
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": { [113 bytes data]
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": 
100   107    0   107    0     0   2782      0 --:--:-- --:--:-- --:--:--  2815
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": * Closing connection 0
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:36.765 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=2100
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:36.935 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=3800
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:37.273 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=7200
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:37.388 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=15700
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": java.io.IOException: Could not read footer: java.lang.RuntimeException: file:/workspace/e2e-tests/controller-spark/dwh/controller_DWH_TIMESTAMP_2025_07_16T17_06_21_092598793Z/Patient/ConvertResourceFn_Patient_output-parquet-th-718-ts-1752685594569-r-446242.parquet is not a Parquet file (too small length: 0)
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": 
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:37.593 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=14000
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:37.812 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=10600
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:37.896 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=12300
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:38.096 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=5500
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:38.397 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=8900
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": java.io.IOException: Could not read footer: java.lang.RuntimeException: file:/workspace/e2e-tests/controller-spark/dwh/controller_DWH_TIMESTAMP_2025_07_16T17_06_21_092598793Z/Encounter/ConvertResourceFn_Encounter_output-parquet-th-406-ts-1752685595339-r-789392.parquet is not a Parquet file (too small length: 0)
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": 
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": java.io.IOException: Could not read footer: java.lang.RuntimeException: file:/workspace/e2e-tests/controller-spark/dwh/controller_DWH_TIMESTAMP_2025_07_16T17_06_21_092598793Z/Observation/ConvertResourceFn_Observation_output-parquet-th-1637-ts-1752685598627-r-555743.parquet is not a Parquet file (too small length: 0)
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": 
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:40.437 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=500
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:42.748 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=3900
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:43.035 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=2200
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": SUCCESSE2E TEST FOR CONTROLLER PARQUET BASED DEPLOYMENT: Total patients: 
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": E2E TEST FOR CONTROLLER PARQUET BASED DEPLOYMENT: Total encounters: 
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": E2E TEST FOR CONTROLLER PARQUET BASED DEPLOYMENT: Total observations: 
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": E2E TEST FOR CONTROLLER PARQUET BASED DEPLOYMENT: Total patient flat rows: 0
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": E2E TEST FOR CONTROLLER PARQUET BASED DEPLOYMENT: Total encounter flat rows: 0
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": E2E TEST FOR CONTROLLER PARQUET BASED DEPLOYMENT: Total observation flat rows: 0
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": E2E TEST FOR CONTROLLER PARQUET BASED DEPLOYMENT: Mismatch in count of records
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": E2E TEST FOR CONTROLLER PARQUET BASED DEPLOYMENT: Actual total patients: , expected total: 79
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": E2E TEST FOR CONTROLLER PARQUET BASED DEPLOYMENT: Actual total encounters: , expected total: 4006
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": E2E TEST FOR CONTROLLER PARQUET BASED DEPLOYMENT: Total observations: , expected total: 17279
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": E2E TEST FOR CONTROLLER PARQUET BASED DEPLOYMENT: Actual total materialized view patients: 0, expected total: 528
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": E2E TEST FOR CONTROLLER PARQUET BASED DEPLOYMENT: Actual total materialized view encounters: 0, expected total: 4006
Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver": E2E TEST FOR CONTROLLER PARQUET BASED DEPLOYMENT: Actual total materialized view observations: 0, expected total: 17279
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:43.074 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=15800
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:43.166 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=7300
Finished Step #20 - "Run E2E Test for Dockerized Controller and Spark Thriftserver"
ERROR
ERROR: build step 20 "us-docker.pkg.dev/cloud-build-fhir/fhir-analytics/e2e-tests/controller-spark:6e4653d" failed: step exited with non-zero status: 2
Step #31 - "Run Batch Pipeline FHIR-search mode with OpenMRS source": 17:06:43.465 [direct-runner-worker] INFO  c.g.fhir.analytics.FetchResources com.google.fhir.analytics.FetchResources$SearchFn.processElement:136 - Fetching 100 resources for state Observation_main; URL= http://openmrs:8080/openmrs/ws/fhir2/R4?_getpages=8beddf0c-3d62-484c-8f13-2b3af1349369&_getpagesoffset=14100
Step #2 - "Launch Sink Server JDBC": �[1A�[2K
Creating sink-server-jdbc ... �[32mdone�[0m
�[1B
Step #1 - "Launch Sink Server Search": �[1A�[2K
Creating sink-server-search ... �[32mdone�[0m
�[1B
Step #0 - "Launch HAPI Source Server": �[1A�[2K
Creating hapi-fhir-db ... �[32mdone�[0m
�[1B�[2A�[2K
Creating hapi-server  ... �[32mdone�[0m
�[2B
Step #19 - "Bring up controller and Spark containers": �[1A�[2K
Creating pipeline-controller ... �[32mdone�[0m
�[1B
Step #28 - "Launch OpenMRS Server and HAPI FHIR Sink Server for OpenMRS": �[1A�[2K
Creating openmrs                 ... �[32mdone�[0m
�[1B