fix(plotAB): remove unneccary what and only plot pc #70
Workflow file for this run
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| # Run CI for R using https://eddelbuettel.github.io/r-ci/ | |
| name: coverage | |
| on: | |
| push: | |
| branches: [main, master, dev] | |
| pull_request: | |
| paths-ignore: | |
| - '**/README.md' | |
| - '**.nix' | |
| - '**.toml' | |
| - 'pkgdown/**' | |
| - 'flake.lock' | |
| - '.gitignore' | |
| - 'Makefile' | |
| - 'LICENSE' | |
| - 'NEWS.md' | |
| env: | |
| _R_CHECK_FORCE_SUGGESTS_: "true" | |
| jobs: | |
| coverage: | |
| runs-on: ubuntu-24.04 | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v4 | |
| - name: Setup | |
| uses: eddelbuettel/github-actions/r-ci@master | |
| - name: Dependencies | |
| run: ./run.sh install_all | |
| - name: Test coverage | |
| run: | | |
| cov <- covr::package_coverage( | |
| quiet = FALSE, | |
| clean = FALSE, | |
| install_path = file.path(normalizePath(Sys.getenv("RUNNER_TEMP"), winslash = "/"), "package") | |
| ) | |
| covr::to_cobertura(cov) | |
| shell: Rscript {0} | |
| - uses: codecov/codecov-action@v5 | |
| with: | |
| fail_ci_if_error: ${{ github.event_name != 'pull_request' || secrets.CODECOV_TOKEN }} | |
| files: ./cobertura.xml | |
| plugins: noop | |
| disable_search: true | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| - name: Show testthat output | |
| if: always() | |
| run: | | |
| ## -------------------------------------------------------------------- | |
| find '${{ runner.temp }}/package' -name 'testthat.Rout*' -exec cat '{}' \; || true | |
| shell: bash | |
| - name: Upload test results | |
| if: failure() | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: coverage-test-failures | |
| path: ${{ runner.temp }}/package |