do not treate default_prefix as CURIE prefix for URIs. Fixes #1041 #1237
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| # Built from: | |
| # https://github.com/actions/checkout/ | |
| # https://github.com/actions/setup-python/ | |
| # https://github.com/codecov/codecov-action | |
| name: Build and test linkml-runtime | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| workflow_dispatch: | |
| jobs: | |
| quality-checks: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@4.2.2 | |
| - name: Install Poetry | |
| run: | | |
| pipx install poetry | |
| pipx inject poetry poetry-dynamic-versioning | |
| - uses: actions/setup-python@v5.6.0 | |
| with: | |
| python-version: 3.13 | |
| - name: Check pyproject.toml and poetry.lock | |
| run: poetry check | |
| - name: Install tox | |
| run: python -m pip install tox | |
| - name: Run codespell | |
| run: tox -e codespell | |
| - name: Run code format checks | |
| run: tox -e format_check | |
| test: | |
| needs: | |
| - quality-checks | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| os: [ubuntu-latest, windows-latest] | |
| python-version: ["3.9", "3.10", "3.11", "3.12", "3.13"] | |
| # Test on Windows with only the oldest and newest Python versions | |
| exclude: | |
| - os: windows-latest | |
| python-version: "3.10" | |
| - os: windows-latest | |
| python-version: "3.11" | |
| - os: windows-latest | |
| python-version: "3.12" | |
| # See https://github.com/snok/install-poetry#running-on-windows | |
| defaults: | |
| run: | |
| shell: bash | |
| runs-on: ${{ matrix.os }} | |
| steps: | |
| - name: Check out repository | |
| uses: actions/checkout@4.2.2 | |
| with: | |
| fetch-depth: 0 | |
| - name: Install Poetry | |
| run: | | |
| pipx install poetry | |
| pipx inject poetry poetry-dynamic-versioning | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v5.6.0 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| cache: 'poetry' | |
| - name: Install library | |
| run: | | |
| poetry install --no-interaction | |
| - name: Generate coverage results | |
| # Set bash shell to fail correctly on Windows https://github.com/actions/runner-images/issues/6668 | |
| shell: bash | |
| run: | | |
| poetry run coverage run -m pytest | |
| poetry run coverage xml | |
| poetry run coverage report -m | |
| - name: Upload coverage report | |
| uses: codecov/codecov-action@v5 | |
| with: | |
| name: codecov-results-${{ matrix.os }}-${{ matrix.python-version }} | |
| token: ${{ secrets.CODECOV_TOKEN }} | |
| file: coverage.xml | |
| fail_ci_if_error: false |