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Upgrade to nmdc-submission-schema v11.10.0-rc.1 #1723

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Merged
merged 2 commits into from
Aug 7, 2025

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Fixes #1722

These changes upgrade to nmdc-submission-schema v11.10.0-rc.1. That version introduces a number of slot name changes (summarized in microbiomedata/submission-schema#347). The accompanying migrator changes existing submission data to match. Finally, there was one place where a few of the renamed/removed slots were referenced in front-end code, and those have been updated as well.

@pkalita-lbl pkalita-lbl requested a review from Copilot August 6, 2025 22:53
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Pull Request Overview

This PR upgrades the nmdc-submission-schema dependency from v11.9.1 to v11.10.0-rc.1, which introduces slot name changes in the submission schema. The upgrade includes a database migration to update existing submission data and updates to frontend code that referenced the renamed slots.

  • Updates the nmdc-submission-schema dependency to v11.10.0-rc.1
  • Adds a database migration to rename slots in existing submission data
  • Updates frontend references to use new slot names

Reviewed Changes

Copilot reviewed 3 out of 3 changed files in this pull request and generated 1 comment.

File Description
pyproject.toml Updates nmdc-submission-schema version dependency
nmdc_server/migrations/versions/0cb677fa8d5e_update_jgi_submission-schema_slot_names.py Adds migration to rename slots in existing submission data
web/src/views/SubmissionPortal/HarmonizerView.vue Updates read-only column references to use new slot names

@pkalita-lbl pkalita-lbl merged commit c89313e into main Aug 7, 2025
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@pkalita-lbl pkalita-lbl deleted the issue-1722-submission-schema-11.10.0-rc.1 branch August 7, 2025 18:51
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Upgrade to nmdc-submission-schema v11.10.0-rc.1 and migrate existing submission data
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