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    23 repositories

    • Rarr

      Public
      A simple native R reader for Zarr Arrays
      rr-packageout-of-memoryon-diskzarrome-zarr
      R
      •
      Other
      •6•45•6•2•Updated Aug 22, 2025Aug 22, 2025

    • biomaRt

      Public
      R package providing query functionality to BioMart instances like Ensembl
      ensemblbioconductorbiomartr
      R
      •16•43•50•1•Updated Aug 22, 2025Aug 22, 2025

    • Huber-group-EMBL.github.io

      Public
      Huber group public webpage
      TeX
      •
      Other
      •21•3•0•0•Updated Aug 18, 2025Aug 18, 2025

    • rhdf5

      Public
      Package providing an interface between HDF5 and R
      rhdf5rhdf5
      R
      •21•67•40•3•Updated Aug 15, 2025Aug 15, 2025

    • CSAMA-website-2023

      Public
      Website for CSAMA
      CSS
      •
      MIT License
      •7•0•0•1•Updated Jul 30, 2025Jul 30, 2025

    • lpsymphony

      Public
      C++
      •5•0•0•0•Updated Apr 8, 2025Apr 8, 2025

    • rhdf5filters

      Public
      Distributing additional HDF5 compression filters as an R package. Intended to be used with rhdf5, however the compiled filters can also be used with external applications.
      compressionhdf5filter-pluginrpackage
      C
      •
      BSD 2-Clause "Simplified" License
      •6•5•1•1•Updated Mar 24, 2025Mar 24, 2025

    • Rhdf5lib

      Public
      Distribution of the HDF5 library in an R package
      hdf5hdf5-librarybioconductor
      R
      •15•6•9•1•Updated Mar 24, 2025Mar 24, 2025

    • mofaCLL

      Public
      R
      •
      GNU General Public License v3.0
      •3•6•0•0•Updated Nov 27, 2024Nov 27, 2024

    • UBDS3-2024

      Public
      Teaching material for the Ukrainian Biological Data Science Summer School 2024
      HTML
      •
      Creative Commons Zero v1.0 Universal
      •1•0•0•0•Updated Jul 22, 2024Jul 22, 2024

    • CITEseqLN-Tcells

      Public
      Multimodal profiling of T-cells in nodal B-cell lymphoma
      t-cellslymphoma
      R
      •
      GNU General Public License v3.0
      •4•6•1•0•Updated Jan 18, 2024Jan 18, 2024

    • EMBL-Career-Analysis

      Public
      R
      •
      GNU General Public License v3.0
      •1•1•0•0•Updated Aug 22, 2023Aug 22, 2023

    • BDS3

      Public
      Biological Data Science
      HTML
      •
      Mozilla Public License 2.0
      •1•2•0•0•Updated Aug 10, 2023Aug 10, 2023

    • NPARC

      Public
      Nonparametric Analysis of Response Curves from Thermal Proteome Profiling Experiments
      R
      •2•12•0•0•Updated May 8, 2023May 8, 2023

    • DepInfeR

      Public
      DepInfeR is an R package for a computational method that integrates two experimentally accessible input data matrices:\n the drug sensitivity profiles of cancer cell lines or primary tumors ex-vivo (X), and the drug affinities of a set of proteins (Y), to infer a matrix of molecular protein dependencies of the cancers (ß).\n DepInfeR deconvolve…
      R
      •0•1•0•0•Updated Apr 4, 2023Apr 4, 2023

    • CLLCytokineScreen2021

      Public
      R
      •0•2•0•0•Updated Mar 20, 2023Mar 20, 2023

    • DepInfeR_workflow

      Public
      R
      •
      GNU Affero General Public License v3.0
      •0•1•0•0•Updated Jan 11, 2022Jan 11, 2022

    • DmelSGI

      Public
      R
      •0•0•0•0•Updated Sep 29, 2021Sep 29, 2021

    • covariate-powered-cross-weighted-multiple-testing

      Public
      pvalue-adjustmentihw
      R
      •2•2•0•0•Updated Aug 8, 2021Aug 8, 2021

    • CLLproteomics

      Public
      HTML
      •0•3•0•0•Updated Jul 1, 2021Jul 1, 2021

    • RNAinteractMAPK

      Public
      R
      •0•1•0•0•Updated Dec 22, 2020Dec 22, 2020

    • HD2013SGI

      Public
      0•0•0•0•Updated Dec 18, 2020Dec 18, 2020

    • RNAinteract

      Public
      R
      •0•1•0•0•Updated Dec 18, 2020Dec 18, 2020