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As a suggestion, I believe it's a more natural syntax, like grep for instance, for searching a snippet, to use the first argument after the options as the initial search string, like this:
pet search [other-flags] <string>
instead of, currently:
pet search [other-flags] --query <string>
If there's a string after all options have been processed, it's natural to expect it to be the search string.
So, if I wanted to search for copy, the command would be:
pet search copy
It feels more natural to me, more alike any other search command, such as grep and locate. The option --query feels unnecessary in this context.