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Merged
merged 95 commits into from
Aug 3, 2022
Merged

Dev #55

merged 95 commits into from
Aug 3, 2022

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stemangiola
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@stemangiola
update benchmark
0568ae3
@stemangiola
fix devs and create counts function
9e46ba8
@stemangiola
set seed for simulation
6fcfbb1
@stemangiola
make model more stable
4c06cad
@stemangiola
use QR decomposition and add utilities
6962e2d
@stemangiola
fix for formula with 2+ covariates
cd84187
@stemangiola
add figures article
8346a8d
@stemangiola
update plots
da9a912
@stemangiola
detect outliers without variance association + update figures
4298644
@stemangiola
update novel result
055cc16
@stemangiola
update figures
1ce5345
@stemangiola
made sure variational approximate MCMC, the means match the sd are un…
32502bf 
…derestimated at times
@stemangiola
approximate variational by default
e42cee6
@stemangiola
Merge pull request #31 from stemangiola/non-centered-parameterisation
7866728 
Non centered parameterisation
@stemangiola
Merge branch 'master' into dev
bb39b21
@stemangiola
small fix
d20a1ed
@stemangiola
no variational default
c9a9ee9
@stemangiola
docs
df21d14
@stemangiola
force full MCMC for last inference
3eaffe9
@stemangiola
Merge pull request #33 from stemangiola/non-centered-parameterisation
8acdfc5 
force full MCMC for last inference
@stemangiola
approximate by default
cd83bde
@stemangiola
Merge branch 'dev' of github.com:stemangiola/sccomp into dev
6bc08b2
@stemangiola
update approximation options
42aab80
@stemangiola
change tests
a37f990
@stemangiola
Merge pull request #32 from stemangiola/dev
05b1985 
Dev
@stemangiola
fix dependencies
0a90dd2
@stemangiola
update benchmark with rlm with proper convergence
0e2a512
@stemangiola
add estimate for simulation
caff0cb
@stemangiola
add estimate argument
af66665
@stemangiola
update equations
efa09ab
@stemangiola
Merge pull request #40 from stemangiola/reformat-results
5ede211 
update output
@stemangiola
add summary plot
768450f
@stemangiola
use beta instead of beta_raw
2f95b60
@stemangiola
fix plots
a8b114c
@stemangiola
fix plot
5469ca9
@stemangiola
merge dev
8f07ea7 
Merge branch 'dev' into fix-var-adjustment

# Please enter a commit message to explain why this merge is necessary,
# especially if it merges an updated upstream into a topic branch.
#
# Lines starting with '#' will be ignored, and an empty message aborts
# the commit.
@stemangiola
update figures and README
911d527
@stemangiola
Merge branch 'master' into dev
f5d8926
@stemangiola
formulae before diff variability pivot
52b66d7
@stemangiola
update formula
996ec0e
@stemangiola
update plotting and figures
b0de7ca
@stemangiola
update equations
37ec018
@stemangiola
update formulae
846d1dd
@stemangiola
update figures
ccafd90
@stemangiola
update plots and README
5141a00
@stemangiola
pull dev
99ef64c 
Merge branch 'dev' of github.com:stemangiola/sccomp into dev

Conflicts:
	README.md
	inst/figures/unnamed-chunk-10-1.png
	inst/figures/unnamed-chunk-11-1.png
	inst/figures/unnamed-chunk-12-1.png
	inst/figures/unnamed-chunk-9-1.png
@stemangiola
update files
56be50a
@stemangiola
update README
6cfefe6
@stemangiola
git ignore
fe9f634
@stemangiola
update build ignore
5b626c1
@stemangiola
name figure scripts
e7a455a
@stemangiola
reformat git ignore
b7bc1a0
@stemangiola
Merge branch 'dev' of github.com:stemangiola/sccomp into dev
5ce4c80
@stemangiola
Merge pull request #43 from stemangiola/master
766349d 
merge master
@stemangiola
Merge pull request #51 from stemangiola/master
1ba467f 
rebase
@stemangiola stemangiola merged commit 229334d into master Aug 3, 2022
stemangiola added a commit that referenced this pull request Sep 17, 2022
@stemangiola
Merge pull request #55 from stemangiola/dev
cdeb786 
Dev
@stemangiola stemangiola deleted the dev branch February 4, 2025 01:37
@stemangiola stemangiola restored the dev branch February 4, 2025 01:37
@stemangiola stemangiola deleted the dev branch June 8, 2025 04:18
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@stemangiola